STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARD22447.1Pfam:pfam05960 Bacterial protein of unknown function (DUF885). (595 aa)    
Predicted Functional Partners:
ARD21456.1
Cytochrome C.
  
     0.573
ARD23089.1
Protein phosphatase; Pfam:pfam00782 Dual specificity phosphatase, catalytic domain.
  
     0.569
ARD22800.1
Pfam:pfam04389 Peptidase family M28.
  
     0.568
ARD22900.1
Serine/threonine protein kinase; Pfam:pfam08378 Nuclease-related domain.
  
     0.551
ARD22863.1
Ligand-gated channel protein; Pfam:pfam07715 TonB-dependent Receptor Plug Domain.
  
     0.548
ARD22864.1
Pfam:pfam07715 TonB-dependent Receptor Plug Domain.
  
     0.525
ARD20707.1
Peptidase S9; Pfam:pfam00326 Prolyl oligopeptidase family.
  
    0.517
ARD20512.1
Pfam:pfam11854 Protein of unknown function (DUF3374).
  
     0.492
ARD22562.1
Methyltransferase.
  
    0.489
ARD22170.1
Pfam:pfam07715 TonB-dependent Receptor Plug Domain.
  
     0.463
Your Current Organism:
Shewanella japonica
NCBI taxonomy Id: 93973
Other names: ATCC BAA-316, CIP 106860, CIP 107849 [[Shewanella pacifica]], DSM 15445 [[Shewanella pacifica]], JCM 21433, KCTC 22435, KMM 3299, KMM 3597 [[Shewanella pacifica]], LMG 19691, LMG:19691, NBRC 103171, S. japonica, Shewanella japonica Ivanova et al. 2001 emend. Thorell et al. 2019, Shewanella pacifica, Shewanella pacifica Ivanova et al. 2004, Shewanella sp. KMM3299, strain R10SW1 [[Shewanella pacifica]]
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.