Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARD20387.1 | ARD22531.1 | SJ2017_0038 | SJ2017_2240 | Carbonic anhydrase. | Carbonate dehydratase; Pfam:pfam00484 Carbonic anhydrase. | 0.844 |
ARD20436.1 | ARD20438.1 | SJ2017_0087 | SJ2017_0089 | Pfam:pfam01226 Formate/nitrite transporter. | Pfam:pfam02560 Cyanate lyase C-terminal domain. | 0.704 |
ARD20436.1 | ARD22276.1 | SJ2017_0087 | SJ2017_1975 | Pfam:pfam01226 Formate/nitrite transporter. | Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Pfam:pfam00465 Iron-containing alcohol dehydrogenase. | 0.454 |
ARD20436.1 | ARD22531.1 | SJ2017_0087 | SJ2017_2240 | Pfam:pfam01226 Formate/nitrite transporter. | Carbonate dehydratase; Pfam:pfam00484 Carbonic anhydrase. | 0.826 |
ARD20438.1 | ARD20436.1 | SJ2017_0089 | SJ2017_0087 | Pfam:pfam02560 Cyanate lyase C-terminal domain. | Pfam:pfam01226 Formate/nitrite transporter. | 0.704 |
ARD20438.1 | ARD22531.1 | SJ2017_0089 | SJ2017_2240 | Pfam:pfam02560 Cyanate lyase C-terminal domain. | Carbonate dehydratase; Pfam:pfam00484 Carbonic anhydrase. | 0.933 |
ARD20438.1 | ARD22920.1 | SJ2017_0089 | SJ2017_2632 | Pfam:pfam02560 Cyanate lyase C-terminal domain. | Pfam:pfam01226 Formate/nitrite transporter. | 0.425 |
ARD20953.1 | ARD22531.1 | SJ2017_0615 | SJ2017_2240 | Hypothetical protein; Pfam:pfam04074 Domain of unknown function (DUF386). | Carbonate dehydratase; Pfam:pfam00484 Carbonic anhydrase. | 0.412 |
ARD21827.1 | ARD22530.1 | SJ2017_1508 | SJ2017_2239 | Sulfate transporter. | Hypothetical protein; Pfam:pfam12697 Alpha/beta hydrolase family. | 0.436 |
ARD21827.1 | ARD22531.1 | SJ2017_1508 | SJ2017_2240 | Sulfate transporter. | Carbonate dehydratase; Pfam:pfam00484 Carbonic anhydrase. | 0.421 |
ARD22276.1 | ARD20436.1 | SJ2017_1975 | SJ2017_0087 | Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Pfam:pfam00465 Iron-containing alcohol dehydrogenase. | Pfam:pfam01226 Formate/nitrite transporter. | 0.454 |
ARD22276.1 | ARD22531.1 | SJ2017_1975 | SJ2017_2240 | Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Pfam:pfam00465 Iron-containing alcohol dehydrogenase. | Carbonate dehydratase; Pfam:pfam00484 Carbonic anhydrase. | 0.418 |
ARD22276.1 | ARD22920.1 | SJ2017_1975 | SJ2017_2632 | Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Pfam:pfam00465 Iron-containing alcohol dehydrogenase. | Pfam:pfam01226 Formate/nitrite transporter. | 0.519 |
ARD22530.1 | ARD21827.1 | SJ2017_2239 | SJ2017_1508 | Hypothetical protein; Pfam:pfam12697 Alpha/beta hydrolase family. | Sulfate transporter. | 0.436 |
ARD22530.1 | ARD22531.1 | SJ2017_2239 | SJ2017_2240 | Hypothetical protein; Pfam:pfam12697 Alpha/beta hydrolase family. | Carbonate dehydratase; Pfam:pfam00484 Carbonic anhydrase. | 0.430 |
ARD22531.1 | ARD20387.1 | SJ2017_2240 | SJ2017_0038 | Carbonate dehydratase; Pfam:pfam00484 Carbonic anhydrase. | Carbonic anhydrase. | 0.844 |
ARD22531.1 | ARD20436.1 | SJ2017_2240 | SJ2017_0087 | Carbonate dehydratase; Pfam:pfam00484 Carbonic anhydrase. | Pfam:pfam01226 Formate/nitrite transporter. | 0.826 |
ARD22531.1 | ARD20438.1 | SJ2017_2240 | SJ2017_0089 | Carbonate dehydratase; Pfam:pfam00484 Carbonic anhydrase. | Pfam:pfam02560 Cyanate lyase C-terminal domain. | 0.933 |
ARD22531.1 | ARD20953.1 | SJ2017_2240 | SJ2017_0615 | Carbonate dehydratase; Pfam:pfam00484 Carbonic anhydrase. | Hypothetical protein; Pfam:pfam04074 Domain of unknown function (DUF386). | 0.412 |
ARD22531.1 | ARD21827.1 | SJ2017_2240 | SJ2017_1508 | Carbonate dehydratase; Pfam:pfam00484 Carbonic anhydrase. | Sulfate transporter. | 0.421 |
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