Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARD20511.1 | ARD23104.1 | SJ2017_0162 | SJ2017_2823 | Dimethylsulfoxide reductase; Pfam:pfam01568 Molydopterin dinucleotide binding domain. | Pfam:pfam13247 4Fe-4S dicluster domain. | 0.920 |
ARD20511.1 | ARD23105.1 | SJ2017_0162 | SJ2017_2824 | Dimethylsulfoxide reductase; Pfam:pfam01568 Molydopterin dinucleotide binding domain. | Pfam:pfam02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain. | 0.417 |
ARD20511.1 | ARD24294.1 | SJ2017_0162 | SJ2017_4066 | Dimethylsulfoxide reductase; Pfam:pfam01568 Molydopterin dinucleotide binding domain. | Formate dehydrogenase subunit gamma; Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB. | 0.645 |
ARD20511.1 | ARD24298.1 | SJ2017_0162 | SJ2017_4070 | Dimethylsulfoxide reductase; Pfam:pfam01568 Molydopterin dinucleotide binding domain. | Formate dehydrogenase subunit gamma; Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB. | 0.645 |
ARD21059.1 | ARD21929.1 | SJ2017_0722 | SJ2017_1616 | Nitrate reductase; Pfam:pfam00384 Molybdopterin oxidoreductase. | Periplasmic nitrate reductase; Pfam:pfam00384 Molybdopterin oxidoreductase. | 0.901 |
ARD21059.1 | ARD23104.1 | SJ2017_0722 | SJ2017_2823 | Nitrate reductase; Pfam:pfam00384 Molybdopterin oxidoreductase. | Pfam:pfam13247 4Fe-4S dicluster domain. | 0.803 |
ARD21059.1 | ARD24294.1 | SJ2017_0722 | SJ2017_4066 | Nitrate reductase; Pfam:pfam00384 Molybdopterin oxidoreductase. | Formate dehydrogenase subunit gamma; Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB. | 0.805 |
ARD21059.1 | ARD24298.1 | SJ2017_0722 | SJ2017_4070 | Nitrate reductase; Pfam:pfam00384 Molybdopterin oxidoreductase. | Formate dehydrogenase subunit gamma; Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB. | 0.805 |
ARD21929.1 | ARD21059.1 | SJ2017_1616 | SJ2017_0722 | Periplasmic nitrate reductase; Pfam:pfam00384 Molybdopterin oxidoreductase. | Nitrate reductase; Pfam:pfam00384 Molybdopterin oxidoreductase. | 0.901 |
ARD21929.1 | ARD23104.1 | SJ2017_1616 | SJ2017_2823 | Periplasmic nitrate reductase; Pfam:pfam00384 Molybdopterin oxidoreductase. | Pfam:pfam13247 4Fe-4S dicluster domain. | 0.803 |
ARD21929.1 | ARD24294.1 | SJ2017_1616 | SJ2017_4066 | Periplasmic nitrate reductase; Pfam:pfam00384 Molybdopterin oxidoreductase. | Formate dehydrogenase subunit gamma; Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB. | 0.805 |
ARD21929.1 | ARD24298.1 | SJ2017_1616 | SJ2017_4070 | Periplasmic nitrate reductase; Pfam:pfam00384 Molybdopterin oxidoreductase. | Formate dehydrogenase subunit gamma; Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB. | 0.805 |
ARD22516.1 | ARD23104.1 | SJ2017_2223 | SJ2017_2823 | Hypothetical protein; Pfam:pfam00384 Molybdopterin oxidoreductase. | Pfam:pfam13247 4Fe-4S dicluster domain. | 0.838 |
ARD22516.1 | ARD24294.1 | SJ2017_2223 | SJ2017_4066 | Hypothetical protein; Pfam:pfam00384 Molybdopterin oxidoreductase. | Formate dehydrogenase subunit gamma; Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB. | 0.645 |
ARD22516.1 | ARD24298.1 | SJ2017_2223 | SJ2017_4070 | Hypothetical protein; Pfam:pfam00384 Molybdopterin oxidoreductase. | Formate dehydrogenase subunit gamma; Pfam:pfam00033 Cytochrome b(N-terminal)/b6/petB. | 0.645 |
ARD23104.1 | ARD20511.1 | SJ2017_2823 | SJ2017_0162 | Pfam:pfam13247 4Fe-4S dicluster domain. | Dimethylsulfoxide reductase; Pfam:pfam01568 Molydopterin dinucleotide binding domain. | 0.920 |
ARD23104.1 | ARD21059.1 | SJ2017_2823 | SJ2017_0722 | Pfam:pfam13247 4Fe-4S dicluster domain. | Nitrate reductase; Pfam:pfam00384 Molybdopterin oxidoreductase. | 0.803 |
ARD23104.1 | ARD21929.1 | SJ2017_2823 | SJ2017_1616 | Pfam:pfam13247 4Fe-4S dicluster domain. | Periplasmic nitrate reductase; Pfam:pfam00384 Molybdopterin oxidoreductase. | 0.803 |
ARD23104.1 | ARD22516.1 | SJ2017_2823 | SJ2017_2223 | Pfam:pfam13247 4Fe-4S dicluster domain. | Hypothetical protein; Pfam:pfam00384 Molybdopterin oxidoreductase. | 0.838 |
ARD23104.1 | ARD23105.1 | SJ2017_2823 | SJ2017_2824 | Pfam:pfam13247 4Fe-4S dicluster domain. | Pfam:pfam02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain. | 0.982 |
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