Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARD20415.1 | ARD21727.1 | SJ2017_0066 | SJ2017_1403 | Pantetheine-phosphate adenylyltransferase; Pfam:pfam01467 Cytidylyltransferase. | Pfam:pfam00696 Amino acid kinase family. | 0.473 |
ARD20415.1 | ARD23170.1 | SJ2017_0066 | SJ2017_2892 | Pantetheine-phosphate adenylyltransferase; Pfam:pfam01467 Cytidylyltransferase. | Pfam:pfam02609 Exonuclease VII small subunit. | 0.586 |
ARD20617.1 | ARD23080.1 | SJ2017_0269 | SJ2017_2799 | RNA polymerase sigma factor FliA; Pfam:pfam04542 Sigma-70 region 2. | Pfam:pfam02699 Preprotein translocase subunit. | 0.580 |
ARD20617.1 | ARD23170.1 | SJ2017_0269 | SJ2017_2892 | RNA polymerase sigma factor FliA; Pfam:pfam04542 Sigma-70 region 2. | Pfam:pfam02609 Exonuclease VII small subunit. | 0.547 |
ARD20617.1 | ARD23199.1 | SJ2017_0269 | SJ2017_2921 | RNA polymerase sigma factor FliA; Pfam:pfam04542 Sigma-70 region 2. | RNA polymerase sigma factor FliA; Pfam:pfam04542 Sigma-70 region 2. | 0.916 |
ARD21424.1 | ARD23170.1 | SJ2017_1093 | SJ2017_2892 | Octaprenyl diphosphate synthase; Pfam:pfam00348 Polyprenyl synthetase. | Pfam:pfam02609 Exonuclease VII small subunit. | 0.644 |
ARD21424.1 | ARD23171.1 | SJ2017_1093 | SJ2017_2893 | Octaprenyl diphosphate synthase; Pfam:pfam00348 Polyprenyl synthetase. | Farnesyl-diphosphate synthase; Pfam:pfam00348 Polyprenyl synthetase. | 0.923 |
ARD21424.1 | ARD23297.1 | SJ2017_1093 | SJ2017_3020 | Octaprenyl diphosphate synthase; Pfam:pfam00348 Polyprenyl synthetase. | Pfam:pfam02601 Exonuclease VII, large subunit. | 0.572 |
ARD21424.1 | ARD24029.1 | SJ2017_1093 | SJ2017_3791 | Octaprenyl diphosphate synthase; Pfam:pfam00348 Polyprenyl synthetase. | Pfam:pfam01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain. | 0.555 |
ARD21727.1 | ARD20415.1 | SJ2017_1403 | SJ2017_0066 | Pfam:pfam00696 Amino acid kinase family. | Pantetheine-phosphate adenylyltransferase; Pfam:pfam01467 Cytidylyltransferase. | 0.473 |
ARD21727.1 | ARD23170.1 | SJ2017_1403 | SJ2017_2892 | Pfam:pfam00696 Amino acid kinase family. | Pfam:pfam02609 Exonuclease VII small subunit. | 0.494 |
ARD21727.1 | ARD23297.1 | SJ2017_1403 | SJ2017_3020 | Pfam:pfam00696 Amino acid kinase family. | Pfam:pfam02601 Exonuclease VII, large subunit. | 0.486 |
ARD23080.1 | ARD20617.1 | SJ2017_2799 | SJ2017_0269 | Pfam:pfam02699 Preprotein translocase subunit. | RNA polymerase sigma factor FliA; Pfam:pfam04542 Sigma-70 region 2. | 0.580 |
ARD23080.1 | ARD23170.1 | SJ2017_2799 | SJ2017_2892 | Pfam:pfam02699 Preprotein translocase subunit. | Pfam:pfam02609 Exonuclease VII small subunit. | 0.594 |
ARD23080.1 | ARD23199.1 | SJ2017_2799 | SJ2017_2921 | Pfam:pfam02699 Preprotein translocase subunit. | RNA polymerase sigma factor FliA; Pfam:pfam04542 Sigma-70 region 2. | 0.580 |
ARD23170.1 | ARD20415.1 | SJ2017_2892 | SJ2017_0066 | Pfam:pfam02609 Exonuclease VII small subunit. | Pantetheine-phosphate adenylyltransferase; Pfam:pfam01467 Cytidylyltransferase. | 0.586 |
ARD23170.1 | ARD20617.1 | SJ2017_2892 | SJ2017_0269 | Pfam:pfam02609 Exonuclease VII small subunit. | RNA polymerase sigma factor FliA; Pfam:pfam04542 Sigma-70 region 2. | 0.547 |
ARD23170.1 | ARD21424.1 | SJ2017_2892 | SJ2017_1093 | Pfam:pfam02609 Exonuclease VII small subunit. | Octaprenyl diphosphate synthase; Pfam:pfam00348 Polyprenyl synthetase. | 0.644 |
ARD23170.1 | ARD21727.1 | SJ2017_2892 | SJ2017_1403 | Pfam:pfam02609 Exonuclease VII small subunit. | Pfam:pfam00696 Amino acid kinase family. | 0.494 |
ARD23170.1 | ARD23080.1 | SJ2017_2892 | SJ2017_2799 | Pfam:pfam02609 Exonuclease VII small subunit. | Pfam:pfam02699 Preprotein translocase subunit. | 0.594 |
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