STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARD23379.1GTP pyrophosphokinase; Pfam:pfam04607 Region found in RelA / SpoT proteins. (735 aa)    
Predicted Functional Partners:
ARD23378.1
Nucleoside triphosphate pyrophosphohydrolase; Pfam:pfam03819 MazG nucleotide pyrophosphohydrolase domain.
 
 
 0.966
ARD23992.1
Exopolyphosphatase; Pfam:pfam02541 Ppx/GppA phosphatase family.
 
 
 0.926
ARD22866.1
Pfam:pfam00334 Nucleoside diphosphate kinase.
    
 0.919
ARD20690.1
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; Pfam:pfam13328 HD domain.
  
  
 
0.916
ARD22033.1
Exopolyphosphatase; Pfam:pfam02541 Ppx/GppA phosphatase family.
  
 
 0.909
ARD22266.1
Pfam:pfam00224 Pyruvate kinase, barrel domain.
   
 
 0.904
ARD21543.1
Guanylate cyclase; Pfam:pfam00211 Adenylate and Guanylate cyclase catalytic domain.
     
 0.900
ARD22887.1
Pfam:pfam13597 Anaerobic ribonucleoside-triphosphate reductase.
     
  0.900
ARD24028.1
Pfam:pfam01295 Adenylate cyclase, class-I.
     
  0.900
ARD24364.1
Adenylate cyclase; Pfam:pfam01928 CYTH domain.
     
  0.900
Your Current Organism:
Shewanella japonica
NCBI taxonomy Id: 93973
Other names: ATCC BAA-316, CIP 106860, CIP 107849 [[Shewanella pacifica]], DSM 15445 [[Shewanella pacifica]], JCM 21433, KCTC 22435, KMM 3299, KMM 3597 [[Shewanella pacifica]], LMG 19691, LMG:19691, NBRC 103171, S. japonica, Shewanella japonica Ivanova et al. 2001 emend. Thorell et al. 2019, Shewanella pacifica, Shewanella pacifica Ivanova et al. 2004, Shewanella sp. KMM3299, strain R10SW1 [[Shewanella pacifica]]
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.