Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARD21376.1 | ARD21559.1 | SJ2017_1045 | SJ2017_1234 | Pfam:pfam03550 Outer membrane lipoprotein LolB. | Pfam:pfam00717 Peptidase S24-like. | 0.552 |
ARD21376.1 | ARD22558.1 | SJ2017_1045 | SJ2017_2268 | Pfam:pfam03550 Outer membrane lipoprotein LolB. | Pfam:pfam03776 Septum formation topological specificity factor MinE. | 0.828 |
ARD21376.1 | ARD23029.1 | SJ2017_1045 | SJ2017_2748 | Pfam:pfam03550 Outer membrane lipoprotein LolB. | Pfam:pfam00717 Peptidase S24-like. | 0.896 |
ARD21376.1 | ARD23073.1 | SJ2017_1045 | SJ2017_2792 | Pfam:pfam03550 Outer membrane lipoprotein LolB. | Pfam:pfam07152 YaeQ protein. | 0.630 |
ARD21376.1 | ARD23553.1 | SJ2017_1045 | SJ2017_3293 | Pfam:pfam03550 Outer membrane lipoprotein LolB. | Pfam:pfam07308 Protein of unknown function (DUF1456). | 0.475 |
ARD21376.1 | ARD23832.1 | SJ2017_1045 | SJ2017_3584 | Pfam:pfam03550 Outer membrane lipoprotein LolB. | Pfam:pfam00521 DNA gyrase/topoisomerase IV, subunit A. | 0.804 |
ARD21559.1 | ARD21376.1 | SJ2017_1234 | SJ2017_1045 | Pfam:pfam00717 Peptidase S24-like. | Pfam:pfam03550 Outer membrane lipoprotein LolB. | 0.552 |
ARD21559.1 | ARD22558.1 | SJ2017_1234 | SJ2017_2268 | Pfam:pfam00717 Peptidase S24-like. | Pfam:pfam03776 Septum formation topological specificity factor MinE. | 0.695 |
ARD21559.1 | ARD23029.1 | SJ2017_1234 | SJ2017_2748 | Pfam:pfam00717 Peptidase S24-like. | Pfam:pfam00717 Peptidase S24-like. | 0.938 |
ARD21559.1 | ARD23073.1 | SJ2017_1234 | SJ2017_2792 | Pfam:pfam00717 Peptidase S24-like. | Pfam:pfam07152 YaeQ protein. | 0.544 |
ARD21559.1 | ARD23553.1 | SJ2017_1234 | SJ2017_3293 | Pfam:pfam00717 Peptidase S24-like. | Pfam:pfam07308 Protein of unknown function (DUF1456). | 0.477 |
ARD21559.1 | ARD23832.1 | SJ2017_1234 | SJ2017_3584 | Pfam:pfam00717 Peptidase S24-like. | Pfam:pfam00521 DNA gyrase/topoisomerase IV, subunit A. | 0.729 |
ARD21706.1 | ARD23553.1 | SJ2017_1382 | SJ2017_3293 | Pfam:pfam14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term. | Pfam:pfam07308 Protein of unknown function (DUF1456). | 0.576 |
ARD22375.1 | ARD23553.1 | SJ2017_2077 | SJ2017_3293 | Fe-S oxidoreductase; Pfam:pfam03692 Putative zinc- or iron-chelating domain. | Pfam:pfam07308 Protein of unknown function (DUF1456). | 0.546 |
ARD22558.1 | ARD21376.1 | SJ2017_2268 | SJ2017_1045 | Pfam:pfam03776 Septum formation topological specificity factor MinE. | Pfam:pfam03550 Outer membrane lipoprotein LolB. | 0.828 |
ARD22558.1 | ARD21559.1 | SJ2017_2268 | SJ2017_1234 | Pfam:pfam03776 Septum formation topological specificity factor MinE. | Pfam:pfam00717 Peptidase S24-like. | 0.695 |
ARD22558.1 | ARD23029.1 | SJ2017_2268 | SJ2017_2748 | Pfam:pfam03776 Septum formation topological specificity factor MinE. | Pfam:pfam00717 Peptidase S24-like. | 0.927 |
ARD22558.1 | ARD23073.1 | SJ2017_2268 | SJ2017_2792 | Pfam:pfam03776 Septum formation topological specificity factor MinE. | Pfam:pfam07152 YaeQ protein. | 0.842 |
ARD22558.1 | ARD23553.1 | SJ2017_2268 | SJ2017_3293 | Pfam:pfam03776 Septum formation topological specificity factor MinE. | Pfam:pfam07308 Protein of unknown function (DUF1456). | 0.588 |
ARD22558.1 | ARD23832.1 | SJ2017_2268 | SJ2017_3584 | Pfam:pfam03776 Septum formation topological specificity factor MinE. | Pfam:pfam00521 DNA gyrase/topoisomerase IV, subunit A. | 0.871 |
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