STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARD23691.1Aminopeptidase N; Pfam:pfam01433 Peptidase family M1. (878 aa)    
Predicted Functional Partners:
ARD23454.1
Cytosol nonspecific dipeptidase; Pfam:pfam07687 Peptidase dimerization domain.
     
 0.915
ARD22107.1
Pfam:pfam11940 Domain of unknown function (DUF3458).
  
  
 
0.912
ARD21469.1
Pfam:pfam00883 Cytosol aminopeptidase family, catalytic domain.
   
 0.911
ARD23775.1
Pfam:pfam00883 Cytosol aminopeptidase family, catalytic domain.
   
 0.911
ARD23453.1
Peptidase M17; Pfam:pfam00883 Cytosol aminopeptidase family, catalytic domain.
   
 0.910
ARD23353.1
Pfam:pfam04262 Glutamate-cysteine ligase.
     
 0.905
ARD21050.1
Pfam:pfam02955 Prokaryotic glutathione synthetase, ATP-grasp domain.
    
 0.904
ARD22707.1
Pfam:pfam01019 Gamma-glutamyltranspeptidase.
     
 0.904
ARD22927.1
Pfam:pfam03917 Eukaryotic glutathione synthase, ATP binding domain.
     
  0.900
ARD23393.1
Pfam:pfam00464 Serine hydroxymethyltransferase.
    
 0.841
Your Current Organism:
Shewanella japonica
NCBI taxonomy Id: 93973
Other names: ATCC BAA-316, CIP 106860, CIP 107849 [[Shewanella pacifica]], DSM 15445 [[Shewanella pacifica]], JCM 21433, KCTC 22435, KMM 3299, KMM 3597 [[Shewanella pacifica]], LMG 19691, LMG:19691, NBRC 103171, S. japonica, Shewanella japonica Ivanova et al. 2001 emend. Thorell et al. 2019, Shewanella pacifica, Shewanella pacifica Ivanova et al. 2004, Shewanella sp. KMM3299, strain R10SW1 [[Shewanella pacifica]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.