Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARD20678.1 | ARD20679.1 | SJ2017_0332 | SJ2017_0333 | Acyl carrier protein; Pfam:pfam00550 Phosphopantetheine attachment site. | Acyl carrier protein. | 0.995 |
ARD20678.1 | ARD21699.1 | SJ2017_0332 | SJ2017_1375 | Acyl carrier protein; Pfam:pfam00550 Phosphopantetheine attachment site. | Omega-3 polyunsaturated fatty acid synthase PfaA; Pfam:pfam00109 Beta-ketoacyl synthase, N-terminal domain. | 0.447 |
ARD20678.1 | ARD22066.1 | SJ2017_0332 | SJ2017_1753 | Acyl carrier protein; Pfam:pfam00550 Phosphopantetheine attachment site. | Acyl carrier protein; Pfam:pfam00550 Phosphopantetheine attachment site. | 0.900 |
ARD20678.1 | ARD23404.1 | SJ2017_0332 | SJ2017_3135 | Acyl carrier protein; Pfam:pfam00550 Phosphopantetheine attachment site. | Ferredoxin. | 0.891 |
ARD20678.1 | ARD23705.1 | SJ2017_0332 | SJ2017_3454 | Acyl carrier protein; Pfam:pfam00550 Phosphopantetheine attachment site. | Hypothetical protein. | 0.895 |
ARD20678.1 | ARD23811.1 | SJ2017_0332 | SJ2017_3562 | Acyl carrier protein; Pfam:pfam00550 Phosphopantetheine attachment site. | Ubiquinol-cytochrome c reductase cytochrome c1 subunit PetC; Pfam:pfam02167 Cytochrome C1 family. | 0.855 |
ARD20678.1 | ARD23813.1 | SJ2017_0332 | SJ2017_3564 | Acyl carrier protein; Pfam:pfam00550 Phosphopantetheine attachment site. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Pfam:pfam00355 Rieske [2Fe-2S] domain. | 0.872 |
ARD20678.1 | ARD24303.1 | SJ2017_0332 | SJ2017_4075 | Acyl carrier protein; Pfam:pfam00550 Phosphopantetheine attachment site. | Pfam:pfam12838 4Fe-4S dicluster domain. | 0.892 |
ARD20678.1 | ARD24405.1 | SJ2017_0332 | SJ2017_4178 | Acyl carrier protein; Pfam:pfam00550 Phosphopantetheine attachment site. | F0F1 ATP synthase subunit gamma; Pfam:pfam00231 ATP synthase. | 0.699 |
ARD20679.1 | ARD20678.1 | SJ2017_0333 | SJ2017_0332 | Acyl carrier protein. | Acyl carrier protein; Pfam:pfam00550 Phosphopantetheine attachment site. | 0.995 |
ARD20679.1 | ARD21699.1 | SJ2017_0333 | SJ2017_1375 | Acyl carrier protein. | Omega-3 polyunsaturated fatty acid synthase PfaA; Pfam:pfam00109 Beta-ketoacyl synthase, N-terminal domain. | 0.447 |
ARD20679.1 | ARD22066.1 | SJ2017_0333 | SJ2017_1753 | Acyl carrier protein. | Acyl carrier protein; Pfam:pfam00550 Phosphopantetheine attachment site. | 0.918 |
ARD20679.1 | ARD23404.1 | SJ2017_0333 | SJ2017_3135 | Acyl carrier protein. | Ferredoxin. | 0.891 |
ARD20679.1 | ARD23705.1 | SJ2017_0333 | SJ2017_3454 | Acyl carrier protein. | Hypothetical protein. | 0.895 |
ARD20679.1 | ARD23811.1 | SJ2017_0333 | SJ2017_3562 | Acyl carrier protein. | Ubiquinol-cytochrome c reductase cytochrome c1 subunit PetC; Pfam:pfam02167 Cytochrome C1 family. | 0.855 |
ARD20679.1 | ARD23813.1 | SJ2017_0333 | SJ2017_3564 | Acyl carrier protein. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Pfam:pfam00355 Rieske [2Fe-2S] domain. | 0.872 |
ARD20679.1 | ARD24303.1 | SJ2017_0333 | SJ2017_4075 | Acyl carrier protein. | Pfam:pfam12838 4Fe-4S dicluster domain. | 0.892 |
ARD20679.1 | ARD24405.1 | SJ2017_0333 | SJ2017_4178 | Acyl carrier protein. | F0F1 ATP synthase subunit gamma; Pfam:pfam00231 ATP synthase. | 0.699 |
ARD21699.1 | ARD20678.1 | SJ2017_1375 | SJ2017_0332 | Omega-3 polyunsaturated fatty acid synthase PfaA; Pfam:pfam00109 Beta-ketoacyl synthase, N-terminal domain. | Acyl carrier protein; Pfam:pfam00550 Phosphopantetheine attachment site. | 0.447 |
ARD21699.1 | ARD20679.1 | SJ2017_1375 | SJ2017_0333 | Omega-3 polyunsaturated fatty acid synthase PfaA; Pfam:pfam00109 Beta-ketoacyl synthase, N-terminal domain. | Acyl carrier protein. | 0.447 |
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