STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARD23770.1Hypothetical protein. (583 aa)    
Predicted Functional Partners:
ARD23769.1
Hypothetical protein; Pfam:pfam09375 Imelysin.
 
     0.898
ARD23768.1
Fe(3+) dicitrate transport protein FecA precursor; Pfam:pfam07715 TonB-dependent Receptor Plug Domain.
 
     0.837
ARD21070.1
Peptidase S8; Pfam:pfam00082 Subtilase family.
  
 
 0.828
ARD23767.1
Pfam:pfam04116 Fatty acid hydroxylase superfamily.
 
     0.800
ARD24091.1
Peptidase S8; Pfam:pfam00082 Subtilase family.
  
   0.781
ARD21179.1
Peptidase S8; Pfam:pfam00082 Subtilase family.
  
 
 0.779
ARD20482.1
Glyoxalase; Pfam:pfam12681 Glyoxalase-like domain.
  
     0.692
ARD21270.1
Hypothetical protein.
  
     0.685
ARD20512.1
Pfam:pfam11854 Protein of unknown function (DUF3374).
  
 
  0.653
ARD22863.1
Ligand-gated channel protein; Pfam:pfam07715 TonB-dependent Receptor Plug Domain.
  
 
   0.637
Your Current Organism:
Shewanella japonica
NCBI taxonomy Id: 93973
Other names: ATCC BAA-316, CIP 106860, CIP 107849 [[Shewanella pacifica]], DSM 15445 [[Shewanella pacifica]], JCM 21433, KCTC 22435, KMM 3299, KMM 3597 [[Shewanella pacifica]], LMG 19691, LMG:19691, NBRC 103171, S. japonica, Shewanella japonica Ivanova et al. 2001 emend. Thorell et al. 2019, Shewanella pacifica, Shewanella pacifica Ivanova et al. 2004, Shewanella sp. KMM3299, strain R10SW1 [[Shewanella pacifica]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.