Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARD20541.1 | ARD20543.1 | SJ2017_0192 | SJ2017_0194 | Pfam:pfam00510 Cytochrome c oxidase subunit III. | Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I. | 0.999 |
ARD20541.1 | ARD20544.1 | SJ2017_0192 | SJ2017_0195 | Pfam:pfam00510 Cytochrome c oxidase subunit III. | Pfam:pfam00116 Cytochrome C oxidase subunit II, periplasmic domain. | 0.999 |
ARD20541.1 | ARD23404.1 | SJ2017_0192 | SJ2017_3135 | Pfam:pfam00510 Cytochrome c oxidase subunit III. | Ferredoxin. | 0.823 |
ARD20541.1 | ARD23811.1 | SJ2017_0192 | SJ2017_3562 | Pfam:pfam00510 Cytochrome c oxidase subunit III. | Ubiquinol-cytochrome c reductase cytochrome c1 subunit PetC; Pfam:pfam02167 Cytochrome C1 family. | 0.976 |
ARD20541.1 | ARD23812.1 | SJ2017_0192 | SJ2017_3563 | Pfam:pfam00510 Cytochrome c oxidase subunit III. | Cytochrome b; Pfam:pfam13631 Cytochrome b(N-terminal)/b6/petB. | 0.998 |
ARD20541.1 | ARD23813.1 | SJ2017_0192 | SJ2017_3564 | Pfam:pfam00510 Cytochrome c oxidase subunit III. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Pfam:pfam00355 Rieske [2Fe-2S] domain. | 0.995 |
ARD20541.1 | ARD24303.1 | SJ2017_0192 | SJ2017_4075 | Pfam:pfam00510 Cytochrome c oxidase subunit III. | Pfam:pfam12838 4Fe-4S dicluster domain. | 0.824 |
ARD20541.1 | ARD24403.1 | SJ2017_0192 | SJ2017_4176 | Pfam:pfam00510 Cytochrome c oxidase subunit III. | Pfam:pfam02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain. | 0.520 |
ARD20541.1 | ARD24405.1 | SJ2017_0192 | SJ2017_4178 | Pfam:pfam00510 Cytochrome c oxidase subunit III. | F0F1 ATP synthase subunit gamma; Pfam:pfam00231 ATP synthase. | 0.549 |
ARD20541.1 | ARD24406.1 | SJ2017_0192 | SJ2017_4179 | Pfam:pfam00510 Cytochrome c oxidase subunit III. | Pfam:pfam00006 ATP synthase alpha/beta family, nucleotide-binding domain. | 0.495 |
ARD20543.1 | ARD20541.1 | SJ2017_0194 | SJ2017_0192 | Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I. | Pfam:pfam00510 Cytochrome c oxidase subunit III. | 0.999 |
ARD20543.1 | ARD20544.1 | SJ2017_0194 | SJ2017_0195 | Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I. | Pfam:pfam00116 Cytochrome C oxidase subunit II, periplasmic domain. | 0.999 |
ARD20543.1 | ARD23404.1 | SJ2017_0194 | SJ2017_3135 | Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I. | Ferredoxin. | 0.796 |
ARD20543.1 | ARD23811.1 | SJ2017_0194 | SJ2017_3562 | Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I. | Ubiquinol-cytochrome c reductase cytochrome c1 subunit PetC; Pfam:pfam02167 Cytochrome C1 family. | 0.971 |
ARD20543.1 | ARD23812.1 | SJ2017_0194 | SJ2017_3563 | Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I. | Cytochrome b; Pfam:pfam13631 Cytochrome b(N-terminal)/b6/petB. | 0.999 |
ARD20543.1 | ARD23813.1 | SJ2017_0194 | SJ2017_3564 | Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Pfam:pfam00355 Rieske [2Fe-2S] domain. | 0.988 |
ARD20543.1 | ARD24303.1 | SJ2017_0194 | SJ2017_4075 | Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I. | Pfam:pfam12838 4Fe-4S dicluster domain. | 0.819 |
ARD20543.1 | ARD24403.1 | SJ2017_0194 | SJ2017_4176 | Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I. | Pfam:pfam02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain. | 0.507 |
ARD20543.1 | ARD24405.1 | SJ2017_0194 | SJ2017_4178 | Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I. | F0F1 ATP synthase subunit gamma; Pfam:pfam00231 ATP synthase. | 0.802 |
ARD20543.1 | ARD24406.1 | SJ2017_0194 | SJ2017_4179 | Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I. | Pfam:pfam00006 ATP synthase alpha/beta family, nucleotide-binding domain. | 0.916 |
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