Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARD20535.1 | ARD20541.1 | SJ2017_0186 | SJ2017_0192 | Electron transporter SenC; Pfam:pfam02630 SCO1/SenC. | Pfam:pfam00510 Cytochrome c oxidase subunit III. | 0.630 |
ARD20535.1 | ARD20543.1 | SJ2017_0186 | SJ2017_0194 | Electron transporter SenC; Pfam:pfam02630 SCO1/SenC. | Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I. | 0.445 |
ARD20535.1 | ARD20544.1 | SJ2017_0186 | SJ2017_0195 | Electron transporter SenC; Pfam:pfam02630 SCO1/SenC. | Pfam:pfam00116 Cytochrome C oxidase subunit II, periplasmic domain. | 0.917 |
ARD20535.1 | ARD23812.1 | SJ2017_0186 | SJ2017_3563 | Electron transporter SenC; Pfam:pfam02630 SCO1/SenC. | Cytochrome b; Pfam:pfam13631 Cytochrome b(N-terminal)/b6/petB. | 0.431 |
ARD20535.1 | ARD23813.1 | SJ2017_0186 | SJ2017_3564 | Electron transporter SenC; Pfam:pfam02630 SCO1/SenC. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Pfam:pfam00355 Rieske [2Fe-2S] domain. | 0.592 |
ARD20535.1 | ARD23842.1 | SJ2017_0186 | SJ2017_3594 | Electron transporter SenC; Pfam:pfam02630 SCO1/SenC. | Pfam:pfam04314 Protein of unknown function (DUF461). | 0.797 |
ARD20541.1 | ARD20535.1 | SJ2017_0192 | SJ2017_0186 | Pfam:pfam00510 Cytochrome c oxidase subunit III. | Electron transporter SenC; Pfam:pfam02630 SCO1/SenC. | 0.630 |
ARD20541.1 | ARD20543.1 | SJ2017_0192 | SJ2017_0194 | Pfam:pfam00510 Cytochrome c oxidase subunit III. | Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I. | 0.999 |
ARD20541.1 | ARD20544.1 | SJ2017_0192 | SJ2017_0195 | Pfam:pfam00510 Cytochrome c oxidase subunit III. | Pfam:pfam00116 Cytochrome C oxidase subunit II, periplasmic domain. | 0.999 |
ARD20541.1 | ARD22354.1 | SJ2017_0192 | SJ2017_2056 | Pfam:pfam00510 Cytochrome c oxidase subunit III. | Pfam:pfam14715 N-terminal domain of cytochrome oxidase-cbb3, FixP. | 0.993 |
ARD20541.1 | ARD23812.1 | SJ2017_0192 | SJ2017_3563 | Pfam:pfam00510 Cytochrome c oxidase subunit III. | Cytochrome b; Pfam:pfam13631 Cytochrome b(N-terminal)/b6/petB. | 0.998 |
ARD20541.1 | ARD23813.1 | SJ2017_0192 | SJ2017_3564 | Pfam:pfam00510 Cytochrome c oxidase subunit III. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Pfam:pfam00355 Rieske [2Fe-2S] domain. | 0.995 |
ARD20541.1 | ARD23842.1 | SJ2017_0192 | SJ2017_3594 | Pfam:pfam00510 Cytochrome c oxidase subunit III. | Pfam:pfam04314 Protein of unknown function (DUF461). | 0.819 |
ARD20543.1 | ARD20535.1 | SJ2017_0194 | SJ2017_0186 | Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I. | Electron transporter SenC; Pfam:pfam02630 SCO1/SenC. | 0.445 |
ARD20543.1 | ARD20541.1 | SJ2017_0194 | SJ2017_0192 | Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I. | Pfam:pfam00510 Cytochrome c oxidase subunit III. | 0.999 |
ARD20543.1 | ARD20544.1 | SJ2017_0194 | SJ2017_0195 | Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I. | Pfam:pfam00116 Cytochrome C oxidase subunit II, periplasmic domain. | 0.999 |
ARD20543.1 | ARD22354.1 | SJ2017_0194 | SJ2017_2056 | Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I. | Pfam:pfam14715 N-terminal domain of cytochrome oxidase-cbb3, FixP. | 0.990 |
ARD20543.1 | ARD23812.1 | SJ2017_0194 | SJ2017_3563 | Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I. | Cytochrome b; Pfam:pfam13631 Cytochrome b(N-terminal)/b6/petB. | 0.999 |
ARD20543.1 | ARD23813.1 | SJ2017_0194 | SJ2017_3564 | Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Pfam:pfam00355 Rieske [2Fe-2S] domain. | 0.988 |
ARD20543.1 | ARD23842.1 | SJ2017_0194 | SJ2017_3594 | Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I. | Pfam:pfam04314 Protein of unknown function (DUF461). | 0.825 |
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