Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARD24336.1 | ARD24337.1 | SJ2017_4109 | SJ2017_4110 | long-chain-fatty-acid--CoA ligase; Pfam:pfam00501 AMP-binding enzyme. | Hypothetical protein. | 0.507 |
ARD24336.1 | ARD24338.1 | SJ2017_4109 | SJ2017_4111 | long-chain-fatty-acid--CoA ligase; Pfam:pfam00501 AMP-binding enzyme. | Pfam:pfam00005 ABC transporter. | 0.568 |
ARD24336.1 | ARD24339.1 | SJ2017_4109 | SJ2017_4112 | long-chain-fatty-acid--CoA ligase; Pfam:pfam00501 AMP-binding enzyme. | Pfam:pfam00392 Bacterial regulatory proteins, gntR family. | 0.427 |
ARD24337.1 | ARD24336.1 | SJ2017_4110 | SJ2017_4109 | Hypothetical protein. | long-chain-fatty-acid--CoA ligase; Pfam:pfam00501 AMP-binding enzyme. | 0.507 |
ARD24337.1 | ARD24338.1 | SJ2017_4110 | SJ2017_4111 | Hypothetical protein. | Pfam:pfam00005 ABC transporter. | 0.791 |
ARD24337.1 | ARD24339.1 | SJ2017_4110 | SJ2017_4112 | Hypothetical protein. | Pfam:pfam00392 Bacterial regulatory proteins, gntR family. | 0.681 |
ARD24337.1 | ARD24340.1 | SJ2017_4110 | SJ2017_4113 | Hypothetical protein. | Transporter; Pfam:pfam08386 TAP-like protein. | 0.523 |
ARD24337.1 | ARD24341.1 | SJ2017_4110 | SJ2017_4114 | Hypothetical protein. | Pfam:pfam00005 ABC transporter. | 0.524 |
ARD24338.1 | ARD24336.1 | SJ2017_4111 | SJ2017_4109 | Pfam:pfam00005 ABC transporter. | long-chain-fatty-acid--CoA ligase; Pfam:pfam00501 AMP-binding enzyme. | 0.568 |
ARD24338.1 | ARD24337.1 | SJ2017_4111 | SJ2017_4110 | Pfam:pfam00005 ABC transporter. | Hypothetical protein. | 0.791 |
ARD24338.1 | ARD24339.1 | SJ2017_4111 | SJ2017_4112 | Pfam:pfam00005 ABC transporter. | Pfam:pfam00392 Bacterial regulatory proteins, gntR family. | 0.831 |
ARD24338.1 | ARD24340.1 | SJ2017_4111 | SJ2017_4113 | Pfam:pfam00005 ABC transporter. | Transporter; Pfam:pfam08386 TAP-like protein. | 0.494 |
ARD24338.1 | ARD24341.1 | SJ2017_4111 | SJ2017_4114 | Pfam:pfam00005 ABC transporter. | Pfam:pfam00005 ABC transporter. | 0.595 |
ARD24339.1 | ARD24336.1 | SJ2017_4112 | SJ2017_4109 | Pfam:pfam00392 Bacterial regulatory proteins, gntR family. | long-chain-fatty-acid--CoA ligase; Pfam:pfam00501 AMP-binding enzyme. | 0.427 |
ARD24339.1 | ARD24337.1 | SJ2017_4112 | SJ2017_4110 | Pfam:pfam00392 Bacterial regulatory proteins, gntR family. | Hypothetical protein. | 0.681 |
ARD24339.1 | ARD24338.1 | SJ2017_4112 | SJ2017_4111 | Pfam:pfam00392 Bacterial regulatory proteins, gntR family. | Pfam:pfam00005 ABC transporter. | 0.831 |
ARD24339.1 | ARD24340.1 | SJ2017_4112 | SJ2017_4113 | Pfam:pfam00392 Bacterial regulatory proteins, gntR family. | Transporter; Pfam:pfam08386 TAP-like protein. | 0.559 |
ARD24339.1 | ARD24341.1 | SJ2017_4112 | SJ2017_4114 | Pfam:pfam00392 Bacterial regulatory proteins, gntR family. | Pfam:pfam00005 ABC transporter. | 0.657 |
ARD24340.1 | ARD24337.1 | SJ2017_4113 | SJ2017_4110 | Transporter; Pfam:pfam08386 TAP-like protein. | Hypothetical protein. | 0.523 |
ARD24340.1 | ARD24338.1 | SJ2017_4113 | SJ2017_4111 | Transporter; Pfam:pfam08386 TAP-like protein. | Pfam:pfam00005 ABC transporter. | 0.494 |
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