STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000402655_00230Unannotated protein. (343 aa)    
Predicted Functional Partners:
GCA_000402655_00030
Unannotated protein.
    
 0.912
GCA_000402655_00090
Unannotated protein.
    
 0.912
GCA_000402655_00231
Unannotated protein.
       0.752
GCA_000402655_00025
Unannotated protein.
 
 
 0.749
GCA_000402655_00229
Unannotated protein.
       0.709
GCA_000402655_00182
Unannotated protein.
    
 
 0.656
GCA_000402655_00843
Unannotated protein.
   
  
 0.515
GCA_000402655_00228
Unannotated protein.
       0.497
GCA_000402655_00938
Unannotated protein.
     
 0.466
GCA_000402655_00472
Unannotated protein.
 
  
 0.450
Your Current Organism:
Marinimicrobia bacterium SCGC AAA298D23
NCBI taxonomy Id: 939857
Other names: M. bacterium SCGC AAA298-D23, Marinimicrobia bacterium SCGC AAA298-D23, SAR406 cluster bacterium SCGC AAA298-D23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.