STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000402655_00261Unannotated protein. (369 aa)    
Predicted Functional Partners:
GCA_000402655_00209
Unannotated protein.
 
 0.985
GCA_000402655_00265
Unannotated protein.
 
 
 0.930
GCA_000402655_00280
Unannotated protein.
 
 
 0.887
GCA_000402655_00264
Unannotated protein.
 
 
 0.866
GCA_000402655_00780
Unannotated protein.
 
 
 0.777
GCA_000402655_00760
Unannotated protein.
  
 
  0.704
GCA_000402655_00286
Unannotated protein.
  
 
  0.654
GCA_000402655_00988
Unannotated protein.
    
  0.636
GCA_000402655_00283
Unannotated protein.
 
 
 0.635
GCA_000402655_00351
Unannotated protein.
  
 
 0.635
Your Current Organism:
Marinimicrobia bacterium SCGC AAA298D23
NCBI taxonomy Id: 939857
Other names: M. bacterium SCGC AAA298-D23, Marinimicrobia bacterium SCGC AAA298-D23, SAR406 cluster bacterium SCGC AAA298-D23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.