STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000402655_00464Unannotated protein. (290 aa)    
Predicted Functional Partners:
GCA_000402655_00462
Unannotated protein.
      0.858
GCA_000402655_00570
Unannotated protein.
  
 
  0.782
GCA_000402655_00173
Unannotated protein.
  
  
  0.711
GCA_000402655_00806
Unannotated protein.
   
 
 0.678
GCA_000402655_00940
Unannotated protein.
     
 0.653
GCA_000402655_00463
Unannotated protein.
 
     0.624
GCA_000402655_00106
Unannotated protein.
  
 
 
0.609
GCA_000402655_00746
Unannotated protein.
   
 
 0.604
GCA_000402655_00807
Unannotated protein.
  
 
 
0.602
GCA_000402655_00107
Unannotated protein.
  
 
  0.578
Your Current Organism:
Marinimicrobia bacterium SCGC AAA298D23
NCBI taxonomy Id: 939857
Other names: M. bacterium SCGC AAA298-D23, Marinimicrobia bacterium SCGC AAA298-D23, SAR406 cluster bacterium SCGC AAA298-D23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.