STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPTP_0029Putative endo-1,4-beta-xylanase. (149 aa)    
Predicted Functional Partners:
MPTP_0028
Putative endo-1,4-beta-xylanase.
     0.994
MPTP_0105
alpha-L-arabinofuranosidase II precursor; Belongs to the glycosyl hydrolase 43 family.
   
 0.881
MPTP_0197
Hypothetical protein.
 
   
 0.786
MPTP_0025
Glycoside hydrolase family 5, candidate beta-glycosidase.
 
  
 0.770
MPTP_0027
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.749
MPTP_0437
Cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.716
MPTP_0026
Putative xylanase.
 
  
 0.707
MPTP_0398
Hypothetical protein.
      0.703
MPTP_0403
Hypothetical protein.
 
     0.622
MPTP_0450
Hypothetical protein.
 
   
 0.603
Your Current Organism:
Melissococcus plutonius
NCBI taxonomy Id: 940190
Other names: M. plutonius ATCC 35311, Melissococcus plutonius ATCC 35311, Melissococcus plutonius NCDO 2443, Melissococcus plutonius str. ATCC 35311, Melissococcus plutonius strain ATCC 35311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.