STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPTP_0323Secreted antigen GbpB/SagA/PcsB, putative peptidoglycan hydrolase. (544 aa)    
Predicted Functional Partners:
MPTP_0920
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.764
ftsE
Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1); Part of the ABC transporter FtsEX involved in cellular division.
 
  
 0.748
MPTP_0322
Rod shape-determining protein MreD.
     
 0.636
MPTP_1149
Pneumococcal vaccine antigen A homolog.
 
  
 0.577
MPTP_0321
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
       0.521
MPTP_0324
Transcriptional regulator, TetR family.
       0.422
MPTP_0777
Cell division protein YlmG/ Ycf19 (putative), YggT family.
  
     0.419
rpoZ
DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
     0.414
MPTP_0723
Cell wall-binding protein.
  
  
 0.406
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
 
     0.401
Your Current Organism:
Melissococcus plutonius
NCBI taxonomy Id: 940190
Other names: M. plutonius ATCC 35311, Melissococcus plutonius ATCC 35311, Melissococcus plutonius NCDO 2443, Melissococcus plutonius str. ATCC 35311, Melissococcus plutonius strain ATCC 35311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.