Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MPTP_0039 | MPTP_0741 | MPTP_0039 | MPTP_0741 | TrmH family tRNA/rRNA methyltransferase YacO; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Similar to ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.688 |
MPTP_0039 | dnaJ | MPTP_0039 | MPTP_1276 | TrmH family tRNA/rRNA methyltransferase YacO; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.596 |
MPTP_0039 | obg | MPTP_0039 | MPTP_1141 | TrmH family tRNA/rRNA methyltransferase YacO; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | GTP-binding protein Obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.580 |
MPTP_0039 | rplU | MPTP_0039 | MPTP_0747 | TrmH family tRNA/rRNA methyltransferase YacO; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.625 |
MPTP_0737 | MPTP_0738 | MPTP_0737 | MPTP_0738 | GTP pyrophosphokinase. | GTP pyrophosphokinase. | 0.776 |
MPTP_0737 | MPTP_0739 | MPTP_0737 | MPTP_0739 | GTP pyrophosphokinase. | GTP pyrophosphokinase. | 0.991 |
MPTP_0737 | MPTP_0741 | MPTP_0737 | MPTP_0741 | GTP pyrophosphokinase. | Similar to ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.632 |
MPTP_0737 | nadK | MPTP_0737 | MPTP_0740 | GTP pyrophosphokinase. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.696 |
MPTP_0738 | MPTP_0737 | MPTP_0738 | MPTP_0737 | GTP pyrophosphokinase. | GTP pyrophosphokinase. | 0.776 |
MPTP_0738 | MPTP_0739 | MPTP_0738 | MPTP_0739 | GTP pyrophosphokinase. | GTP pyrophosphokinase. | 0.826 |
MPTP_0738 | MPTP_0741 | MPTP_0738 | MPTP_0741 | GTP pyrophosphokinase. | Similar to ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.699 |
MPTP_0738 | nadK | MPTP_0738 | MPTP_0740 | GTP pyrophosphokinase. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.709 |
MPTP_0739 | MPTP_0737 | MPTP_0739 | MPTP_0737 | GTP pyrophosphokinase. | GTP pyrophosphokinase. | 0.991 |
MPTP_0739 | MPTP_0738 | MPTP_0739 | MPTP_0738 | GTP pyrophosphokinase. | GTP pyrophosphokinase. | 0.826 |
MPTP_0739 | MPTP_0741 | MPTP_0739 | MPTP_0741 | GTP pyrophosphokinase. | Similar to ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.717 |
MPTP_0739 | nadK | MPTP_0739 | MPTP_0740 | GTP pyrophosphokinase. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.769 |
MPTP_0741 | MPTP_0039 | MPTP_0741 | MPTP_0039 | Similar to ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | TrmH family tRNA/rRNA methyltransferase YacO; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.688 |
MPTP_0741 | MPTP_0737 | MPTP_0741 | MPTP_0737 | Similar to ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | GTP pyrophosphokinase. | 0.632 |
MPTP_0741 | MPTP_0738 | MPTP_0741 | MPTP_0738 | Similar to ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | GTP pyrophosphokinase. | 0.699 |
MPTP_0741 | MPTP_0739 | MPTP_0741 | MPTP_0739 | Similar to ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | GTP pyrophosphokinase. | 0.717 |
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