STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPTP_08202-C-methyl-D-erythritol 4-phosphatecytidylyltransferase. (234 aa)    
Predicted Functional Partners:
MPTP_0821
dTDP-glucose 4,6-dehydratase.
 
   
 0.957
MPTP_0819
Beta-1,3-glucosyltransferase.
  
  
 0.751
MPTP_0823
CDP-glycerol glycerophosphotransferase.
  
  
 0.731
MPTP_0822
Hypothetical protein.
       0.721
MPTP_0035
Pili retraction protein pilT.
  
    0.652
MPTP_0824
Hypothetical protein.
     
 0.614
MPTP_0818
Hypothetical protein.
  
  
 0.601
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
 
  
 0.597
MPTP_0826
Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids.
  
  
 0.486
MPTP_0759
Geranylgeranyl diphosphate synthase, type II; Octaprenyl-diphosphate synthase/ dimethylallyltransferase/ geranyltranstransferase (farnesyldiphosphate synthase)/ geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
 
  
 0.478
Your Current Organism:
Melissococcus plutonius
NCBI taxonomy Id: 940190
Other names: M. plutonius ATCC 35311, Melissococcus plutonius ATCC 35311, Melissococcus plutonius NCDO 2443, Melissococcus plutonius str. ATCC 35311, Melissococcus plutonius strain ATCC 35311
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