STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPTP_0914ComF operon protein A, DNA transporter ATPase. (440 aa)    
Predicted Functional Partners:
MPTP_0915
ComF operon protein C.
 
  
 0.955
MPTP_1454
Late competence protein ComGB, access of DNA to ComEA.
   
  
 0.785
MPTP_1252
dCMP deaminase, late competence protein ComEB.
   
  
 0.760
MPTP_1433
Single-stranded DNA-binding protein.
  
  
 0.726
MPTP_1453
Late competence protein ComGB, access of DNA to ComEA.
   
  
 0.704
MPTP_1392
Late competence protein ComGC, access of DNA to ComEA.
  
  
 0.701
MPTP_1391
Late competence protein ComGD, access of DNA to ComEA.
   
  
 0.687
MPTP_1250
Late competence protein ComEC, DNA transport.
   
  
 0.628
hpf
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
    
 0.624
gpsB
Cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
  
     0.619
Your Current Organism:
Melissococcus plutonius
NCBI taxonomy Id: 940190
Other names: M. plutonius ATCC 35311, Melissococcus plutonius ATCC 35311, Melissococcus plutonius NCDO 2443, Melissococcus plutonius str. ATCC 35311, Melissococcus plutonius strain ATCC 35311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.