STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPTP_1710Rhamnogalacturonides degradation protein RhiN. (370 aa)    
Predicted Functional Partners:
MPTP_1705
Hypothetical protein.
 
    0.797
MPTP_1704
Hypothetical protein.
 
    0.773
MPTP_1829
ABC-type Fe3+ transport system, periplasmic component.
  
     0.725
MPTP_0358
Rhamnogalacturonan acetylesterase.
 
    0.716
MPTP_1709
Rhamnogalacturonide transporter RhiT.
 
    0.714
MPTP_1755
Rhamnogalacturonate lyase precursor, rhamnogalacturonase.
  
     0.707
MPTP_0468
Rhamnogalacturonan acetylesterase.
    0.701
MPTP_0357
Rhamnogalacturonate lyase precursor (Rhamnogalacturonase).
  
     0.691
MPTP_0403
Hypothetical protein.
 
     0.687
MPTP_1720
Pectate lyase.
 
   
 0.671
Your Current Organism:
Melissococcus plutonius
NCBI taxonomy Id: 940190
Other names: M. plutonius ATCC 35311, Melissococcus plutonius ATCC 35311, Melissococcus plutonius NCDO 2443, Melissococcus plutonius str. ATCC 35311, Melissococcus plutonius strain ATCC 35311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.