Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GPC3 | L5JNC0_PTEAL | L5K1V5 | L5JNC0 | Glypican-3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Heparanase-2. | 0.490 |
GPC3 | L5KUC7_PTEAL | L5K1V5 | L5KUC7 | Glypican-3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Glypican-1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.409 |
GPC3 | SDC1 | L5K1V5 | L5KRD8 | Glypican-3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.582 |
GPC3 | SDC3 | L5K1V5 | L5JRI8 | Glypican-3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.629 |
GPC5 | L5JNC0_PTEAL | L5KKH9 | L5JNC0 | Glypican-5; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Heparanase-2. | 0.494 |
GPC5 | L5KUC7_PTEAL | L5KKH9 | L5KUC7 | Glypican-5; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Glypican-1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.415 |
GPC5 | SDC1 | L5KKH9 | L5KRD8 | Glypican-5; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.474 |
GPC5 | SDC3 | L5KKH9 | L5JRI8 | Glypican-5; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.588 |
L5JNC0_PTEAL | GPC3 | L5JNC0 | L5K1V5 | Heparanase-2. | Glypican-3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.490 |
L5JNC0_PTEAL | GPC5 | L5JNC0 | L5KKH9 | Heparanase-2. | Glypican-5; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.494 |
L5JNC0_PTEAL | L5K682_PTEAL | L5JNC0 | L5K682 | Heparanase-2. | Chromodomain-helicase-DNA-binding protein 1-like protein. | 0.633 |
L5JNC0_PTEAL | L5KP94_PTEAL | L5JNC0 | L5KP94 | Heparanase-2. | Olfactory receptor 10G6; Belongs to the G-protein coupled receptor 1 family. | 0.538 |
L5JNC0_PTEAL | L5KUC7_PTEAL | L5JNC0 | L5KUC7 | Heparanase-2. | Glypican-1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.469 |
L5JNC0_PTEAL | PTPRO | L5JNC0 | L5KMI3 | Heparanase-2. | Receptor-type tyrosine-protein phosphatase O. | 0.418 |
L5JNC0_PTEAL | SDC1 | L5JNC0 | L5KRD8 | Heparanase-2. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.724 |
L5JNC0_PTEAL | SDC3 | L5JNC0 | L5JRI8 | Heparanase-2. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.496 |
L5JNC0_PTEAL | SPINT2 | L5JNC0 | L5KPN5 | Heparanase-2. | Kunitz-type protease inhibitor 2. | 0.454 |
L5K682_PTEAL | L5JNC0_PTEAL | L5K682 | L5JNC0 | Chromodomain-helicase-DNA-binding protein 1-like protein. | Heparanase-2. | 0.633 |
L5K682_PTEAL | PTPRO | L5K682 | L5KMI3 | Chromodomain-helicase-DNA-binding protein 1-like protein. | Receptor-type tyrosine-protein phosphatase O. | 0.600 |
L5KP94_PTEAL | L5JNC0_PTEAL | L5KP94 | L5JNC0 | Olfactory receptor 10G6; Belongs to the G-protein coupled receptor 1 family. | Heparanase-2. | 0.538 |
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