STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMSN1SAM domain-containing protein SAMSN-1. (444 aa)    
Predicted Functional Partners:
TNFSF15
Tumor necrosis factor ligand superfamily member 15.
      
 0.741
GPC3
Glypican-3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
      
 0.729
DEF8
Differentially expressed in FDCP 8 like protein.
   
  
 0.725
LRRC2
Lactotransferrin; Belongs to the transferrin family.
      
 0.721
PRSS36
Polyserase-2; Belongs to the peptidase S1 family.
      
 0.721
SH3D19
SH3 domain-containing protein 19.
   
 
 0.530
RBM11
Putative RNA-binding protein 11.
      
 0.510
L5K718_PTEAL
C-jun-amino-terminal kinase-interacting protein 2.
      
 0.509
KLF9
Krueppel-like factor 9.
      
 0.506
L5KPT8_PTEAL
CTP synthase 2.
      
 0.491
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.