STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIP11Thyroid receptor-interacting protein 11. (1972 aa)    
Predicted Functional Partners:
IFT20
Intraflagellar transport protein 20 like protein.
   
 0.920
SEC24B
Protein transport protein Sec24B.
   
 0.597
L5KNM4_PTEAL
Nance-Horan syndrome protein.
   
 0.576
ARF5
ADP-ribosylation factor 5; Belongs to the small GTPase superfamily. Arf family.
   
 0.570
MIB1
E3 ubiquitin-protein ligase MIB1.
    
 0.560
L5JS90_PTEAL
Alkaline phosphatase, tissue-nonspecific isozyme.
   
 0.551
L5KGZ6_PTEAL
Coiled-coil domain-containing protein 27.
      
 0.518
ARL4C
ADP-ribosylation factor-like protein 4C; Belongs to the small GTPase superfamily. Arf family.
   
 0.517
USO1
General vesicular transport factor p115.
   
 0.504
L5K788_PTEAL
Golgin subfamily A member 2.
   
 
 0.484
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.