Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARF6 | RAB11A | L5K3E9 | L5K0U3 | ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. | Ras-related protein Rab-11A. | 0.431 |
ARF6 | RAB11B | L5K3E9 | L5K969 | ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. | Ras-related protein Rab-11B. | 0.431 |
ARF6 | RAB11FIP3 | L5K3E9 | L5KGU0 | ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. | Rab11 family-interacting protein 3. | 0.829 |
ARF6 | RAB11FIP4 | L5K3E9 | L5JR33 | ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. | Rab11 family-interacting protein 4. | 0.618 |
GSC | RAB11FIP3 | L5JQF5 | L5KGU0 | Homeobox protein goosecoid. | Rab11 family-interacting protein 3. | 0.664 |
GSC | RAB11FIP4 | L5JQF5 | L5JR33 | Homeobox protein goosecoid. | Rab11 family-interacting protein 4. | 0.664 |
L5JVI9_PTEAL | RAB11A | L5JVI9 | L5K0U3 | RAB3A-interacting protein. | Ras-related protein Rab-11A. | 0.868 |
L5JVI9_PTEAL | RAB11B | L5JVI9 | L5K969 | RAB3A-interacting protein. | Ras-related protein Rab-11B. | 0.868 |
L5JVI9_PTEAL | RAB11FIP3 | L5JVI9 | L5KGU0 | RAB3A-interacting protein. | Rab11 family-interacting protein 3. | 0.892 |
L5JVI9_PTEAL | RAB11FIP4 | L5JVI9 | L5JR33 | RAB3A-interacting protein. | Rab11 family-interacting protein 4. | 0.559 |
L5JVI9_PTEAL | RAB25 | L5JVI9 | L5JTT1 | RAB3A-interacting protein. | Ras-related protein Rab-25. | 0.698 |
L5JVI9_PTEAL | RAB3IL1 | L5JVI9 | L5KQF9 | RAB3A-interacting protein. | Guanine nucleotide exchange factor for Rab3A. | 0.588 |
L5JVI9_PTEAL | RABL2B | L5JVI9 | L5K715 | RAB3A-interacting protein. | Rab-like protein 2B. | 0.698 |
RAB11A | ARF6 | L5K0U3 | L5K3E9 | Ras-related protein Rab-11A. | ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. | 0.431 |
RAB11A | L5JVI9_PTEAL | L5K0U3 | L5JVI9 | Ras-related protein Rab-11A. | RAB3A-interacting protein. | 0.868 |
RAB11A | RAB11B | L5K0U3 | L5K969 | Ras-related protein Rab-11A. | Ras-related protein Rab-11B. | 0.900 |
RAB11A | RAB11FIP1 | L5K0U3 | L5KBM3 | Ras-related protein Rab-11A. | Rab11 family-interacting protein 1. | 0.978 |
RAB11A | RAB11FIP3 | L5K0U3 | L5KGU0 | Ras-related protein Rab-11A. | Rab11 family-interacting protein 3. | 0.823 |
RAB11A | RAB11FIP4 | L5K0U3 | L5JR33 | Ras-related protein Rab-11A. | Rab11 family-interacting protein 4. | 0.745 |
RAB11A | RAB3IL1 | L5K0U3 | L5KQF9 | Ras-related protein Rab-11A. | Guanine nucleotide exchange factor for Rab3A. | 0.789 |
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