STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXB1Homeobox protein Hox-B1. (304 aa)    
Predicted Functional Partners:
HOXD1
Homeobox protein Hox-D1.
  
0.929
HOXA1
Homeobox protein Hox-A1.
  
0.921
L5K8V3_PTEAL
Pre-B-cell leukemia transcription factor 3.
    
 0.696
PBX3
Pre-B-cell leukemia transcription factor 3.
    
 0.696
L5KY58_PTEAL
Pre-B-cell leukemia transcription factor 1.
    
 0.696
PBX1
Pre-B-cell leukemia transcription factor 1.
    
 0.696
PBX2
Pre-B-cell leukemia transcription factor 2.
    
 0.637
PBX4
Pre-B-cell leukemia transcription factor 4.
    
 0.637
L5KK77_PTEAL
T-box transcription factor TBX6.
   
 
 0.617
PKNOX1
Homeobox protein PKNOX1.
   
 0.584
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.