Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C1QTNF2 | PCDH12 | L5L0R7 | L5JUK1 | Complement C1q tumor necrosis factor-related protein 2. | Protocadherin-12. | 0.425 |
CDH5 | PCDH12 | L5KU39 | L5JUK1 | Cadherin-5; Cadherins are calcium-dependent cell adhesion proteins. | Protocadherin-12. | 0.428 |
GBE1 | PCDH12 | L5JP94 | L5JUK1 | 1,4-alpha-glucan-branching enzyme. | Protocadherin-12. | 0.593 |
GCM1 | PCDH12 | L5JLH7 | L5JUK1 | Chorion-specific transcription factor GCMa. | Protocadherin-12. | 0.513 |
L5K277_PTEAL | PCDH12 | L5K277 | L5JUK1 | Abl interactor 2. | Protocadherin-12. | 0.499 |
L5L3T5_PTEAL | PCDH12 | L5L3T5 | L5JUK1 | A disintegrin and metalloproteinase with thrombospondin motif 15. | Protocadherin-12. | 0.422 |
NCAPD2 | NCAPD3 | L5KI19 | L5L4H3 | Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. | Condensin-2 complex subunit D3; Regulatory subunit of the condensin-2 complex, a complex which establishes mitotic chromosome architecture and is involved in physical rigidity of the chromatid axis. | 0.532 |
NCAPD2 | PCDH12 | L5KI19 | L5JUK1 | Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. | Protocadherin-12. | 0.517 |
NCAPD3 | NCAPD2 | L5L4H3 | L5KI19 | Condensin-2 complex subunit D3; Regulatory subunit of the condensin-2 complex, a complex which establishes mitotic chromosome architecture and is involved in physical rigidity of the chromatid axis. | Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. | 0.532 |
NCAPD3 | PCDH12 | L5L4H3 | L5JUK1 | Condensin-2 complex subunit D3; Regulatory subunit of the condensin-2 complex, a complex which establishes mitotic chromosome architecture and is involved in physical rigidity of the chromatid axis. | Protocadherin-12. | 0.518 |
PCDH12 | C1QTNF2 | L5JUK1 | L5L0R7 | Protocadherin-12. | Complement C1q tumor necrosis factor-related protein 2. | 0.425 |
PCDH12 | CDH5 | L5JUK1 | L5KU39 | Protocadherin-12. | Cadherin-5; Cadherins are calcium-dependent cell adhesion proteins. | 0.428 |
PCDH12 | GBE1 | L5JUK1 | L5JP94 | Protocadherin-12. | 1,4-alpha-glucan-branching enzyme. | 0.593 |
PCDH12 | GCM1 | L5JUK1 | L5JLH7 | Protocadherin-12. | Chorion-specific transcription factor GCMa. | 0.513 |
PCDH12 | L5K277_PTEAL | L5JUK1 | L5K277 | Protocadherin-12. | Abl interactor 2. | 0.499 |
PCDH12 | L5L3T5_PTEAL | L5JUK1 | L5L3T5 | Protocadherin-12. | A disintegrin and metalloproteinase with thrombospondin motif 15. | 0.422 |
PCDH12 | NCAPD2 | L5JUK1 | L5KI19 | Protocadherin-12. | Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. | 0.517 |
PCDH12 | NCAPD3 | L5JUK1 | L5L4H3 | Protocadherin-12. | Condensin-2 complex subunit D3; Regulatory subunit of the condensin-2 complex, a complex which establishes mitotic chromosome architecture and is involved in physical rigidity of the chromatid axis. | 0.518 |
PCDH12 | TUBGCP2 | L5JUK1 | L5KLY5 | Protocadherin-12. | Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. | 0.507 |
PCDH12 | USHBP1 | L5JUK1 | L5L6T1 | Protocadherin-12. | USH1C-binding protein 1. | 0.563 |
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