L5JVX7_PTEAL protein (Pteropus alecto) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

L5JVX7_PTEAL

Tyrosine-protein phosphatase non-receptor type 9. (644 aa)

Predicted Functional Partners:

AP4B1

0.742

AP4E1

0.741

SERINC1

0.733

LNPEP

0.727

RNF44

0.723

NREP

0.686

L5L325_PTEAL

0.685

SERINC3

0.596

PLXDC2

0.519

TRAPPC8

0.513

Your Current Organism:

Pteropus alecto

NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AP4B1	AP4E1	L5K308	L5K3V2	AP complex subunit beta; Belongs to the adaptor complexes large subunit family.	AP-4 complex subunit epsilon; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system.	0.999
AP4B1	L5JVX7_PTEAL	L5K308	L5JVX7	AP complex subunit beta; Belongs to the adaptor complexes large subunit family.	Tyrosine-protein phosphatase non-receptor type 9.	0.742
AP4B1	L5L325_PTEAL	L5K308	L5L325	AP complex subunit beta; Belongs to the adaptor complexes large subunit family.	Sn1-specific diacylglycerol lipase beta.	0.753
AP4B1	LNPEP	L5K308	L5KIY8	AP complex subunit beta; Belongs to the adaptor complexes large subunit family.	Leucyl-cystinyl aminopeptidase.	0.721
AP4B1	SERINC1	L5K308	L5JP35	AP complex subunit beta; Belongs to the adaptor complexes large subunit family.	Serine incorporator 1.	0.789
AP4B1	SERINC3	L5K308	L5JYR1	AP complex subunit beta; Belongs to the adaptor complexes large subunit family.	Serine incorporator 3.	0.703
AP4E1	AP4B1	L5K3V2	L5K308	AP-4 complex subunit epsilon; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system.	AP complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.999
AP4E1	L5JVX7_PTEAL	L5K3V2	L5JVX7	AP-4 complex subunit epsilon; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system.	Tyrosine-protein phosphatase non-receptor type 9.	0.741
AP4E1	L5L325_PTEAL	L5K3V2	L5L325	AP-4 complex subunit epsilon; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system.	Sn1-specific diacylglycerol lipase beta.	0.763
AP4E1	LNPEP	L5K3V2	L5KIY8	AP-4 complex subunit epsilon; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system.	Leucyl-cystinyl aminopeptidase.	0.751
AP4E1	SERINC1	L5K3V2	L5JP35	AP-4 complex subunit epsilon; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system.	Serine incorporator 1.	0.861
AP4E1	SERINC3	L5K3V2	L5JYR1	AP-4 complex subunit epsilon; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system.	Serine incorporator 3.	0.717
L5JVX7_PTEAL	AP4B1	L5JVX7	L5K308	Tyrosine-protein phosphatase non-receptor type 9.	AP complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.742
L5JVX7_PTEAL	AP4E1	L5JVX7	L5K3V2	Tyrosine-protein phosphatase non-receptor type 9.	AP-4 complex subunit epsilon; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system.	0.741
L5JVX7_PTEAL	L5L325_PTEAL	L5JVX7	L5L325	Tyrosine-protein phosphatase non-receptor type 9.	Sn1-specific diacylglycerol lipase beta.	0.685
L5JVX7_PTEAL	LNPEP	L5JVX7	L5KIY8	Tyrosine-protein phosphatase non-receptor type 9.	Leucyl-cystinyl aminopeptidase.	0.727
L5JVX7_PTEAL	NREP	L5JVX7	L5KLW8	Tyrosine-protein phosphatase non-receptor type 9.	Neuronal protein 3.1.	0.686
L5JVX7_PTEAL	PLXDC2	L5JVX7	L5L014	Tyrosine-protein phosphatase non-receptor type 9.	Plexin domain-containing protein 2.	0.519
L5JVX7_PTEAL	RNF44	L5JVX7	L5JVQ0	Tyrosine-protein phosphatase non-receptor type 9.	RING finger protein 44.	0.723
L5JVX7_PTEAL	SERINC1	L5JVX7	L5JP35	Tyrosine-protein phosphatase non-receptor type 9.	Serine incorporator 1.	0.733