Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GIPC3 | HMG20A | L5L6P4 | L5JWP2 | Uncharacterized protein. | High mobility group protein 20A. | 0.819 |
GIPC3 | KDM1A | L5L6P4 | L5JS71 | Uncharacterized protein. | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.964 |
GIPC3 | L5JNG3_PTEAL | L5L6P4 | L5JNG3 | Uncharacterized protein. | Genetic suppressor element 1. | 0.847 |
GIPC3 | L5KZ43_PTEAL | L5L6P4 | L5KZ43 | Uncharacterized protein. | PHD finger protein 21A. | 0.976 |
GIPC3 | RCOR1 | L5L6P4 | L5JP76 | Uncharacterized protein. | REST corepressor 1. | 0.961 |
GIPC3 | RCOR3 | L5L6P4 | L5KXL1 | Uncharacterized protein. | REST corepressor 3. | 0.716 |
HMG20A | GIPC3 | L5JWP2 | L5L6P4 | High mobility group protein 20A. | Uncharacterized protein. | 0.819 |
HMG20A | KDM1A | L5JWP2 | L5JS71 | High mobility group protein 20A. | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.759 |
HMG20A | L5JNG3_PTEAL | L5JWP2 | L5JNG3 | High mobility group protein 20A. | Genetic suppressor element 1. | 0.840 |
HMG20A | L5KMT1_PTEAL | L5JWP2 | L5KMT1 | High mobility group protein 20A. | Zinc finger protein 189. | 0.646 |
HMG20A | L5KZ43_PTEAL | L5JWP2 | L5KZ43 | High mobility group protein 20A. | PHD finger protein 21A. | 0.781 |
HMG20A | PHF14 | L5JWP2 | L5KMK8 | High mobility group protein 20A. | PHD finger protein 14. | 0.620 |
HMG20A | RCOR1 | L5JWP2 | L5JP76 | High mobility group protein 20A. | REST corepressor 1. | 0.720 |
HMG20A | RCOR3 | L5JWP2 | L5KXL1 | High mobility group protein 20A. | REST corepressor 3. | 0.718 |
HMG20A | SMARCAD1 | L5JWP2 | L5KR11 | High mobility group protein 20A. | annotation not available | 0.712 |
HMG20A | XKR6 | L5JWP2 | L5L1C2 | High mobility group protein 20A. | XK-related protein. | 0.761 |
KDM1A | GIPC3 | L5JS71 | L5L6P4 | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | Uncharacterized protein. | 0.964 |
KDM1A | HMG20A | L5JS71 | L5JWP2 | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | High mobility group protein 20A. | 0.759 |
KDM1A | L5JNG3_PTEAL | L5JS71 | L5JNG3 | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | Genetic suppressor element 1. | 0.501 |
KDM1A | L5KZ43_PTEAL | L5JS71 | L5KZ43 | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | PHD finger protein 21A. | 0.973 |
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