Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APP | CNTN2 | L5KXN3 | L5JXU1 | Amyloid beta A4 protein. | Contactin-2. | 0.664 |
APP | L5KGT4_PTEAL | L5KXN3 | L5KGT4 | Amyloid beta A4 protein. | Neural cell adhesion molecule L1. | 0.494 |
CNTN2 | APP | L5JXU1 | L5KXN3 | Contactin-2. | Amyloid beta A4 protein. | 0.664 |
CNTN2 | CNTNAP2 | L5JXU1 | L5K374 | Contactin-2. | Contactin-associated protein-like 2. | 0.931 |
CNTN2 | L5JWA2_PTEAL | L5JXU1 | L5JWA2 | Contactin-2. | Neurofascin. | 0.631 |
CNTN2 | L5K7U6_PTEAL | L5JXU1 | L5K7U6 | Contactin-2. | Receptor-type tyrosine-protein phosphatase gamma. | 0.606 |
CNTN2 | L5KGT4_PTEAL | L5JXU1 | L5KGT4 | Contactin-2. | Neural cell adhesion molecule L1. | 0.765 |
CNTN2 | L5KUT9_PTEAL | L5JXU1 | L5KUT9 | Contactin-2. | Neural cell adhesion molecule L1-like protein. | 0.651 |
CNTN2 | L5L1R7_PTEAL | L5JXU1 | L5L1R7 | Contactin-2. | Sushi domain-containing protein 1. | 0.621 |
CNTN2 | NRCAM | L5JXU1 | L5JSV5 | Contactin-2. | Neuronal cell adhesion molecule. | 0.782 |
CNTN2 | PTPRG | L5JXU1 | L5KB95 | Contactin-2. | Receptor-type tyrosine-protein phosphatase gamma. | 0.606 |
CNTN2 | ST8SIA2 | L5JXU1 | L5JUU6 | Contactin-2. | Alpha-2,8-sialyltransferase 8B; Belongs to the glycosyltransferase 29 family. | 0.549 |
CNTNAP2 | CNTN2 | L5K374 | L5JXU1 | Contactin-associated protein-like 2. | Contactin-2. | 0.931 |
L5JWA2_PTEAL | CNTN2 | L5JWA2 | L5JXU1 | Neurofascin. | Contactin-2. | 0.631 |
L5JWA2_PTEAL | L5K7U6_PTEAL | L5JWA2 | L5K7U6 | Neurofascin. | Receptor-type tyrosine-protein phosphatase gamma. | 0.566 |
L5JWA2_PTEAL | L5KUT9_PTEAL | L5JWA2 | L5KUT9 | Neurofascin. | Neural cell adhesion molecule L1-like protein. | 0.447 |
L5JWA2_PTEAL | NRCAM | L5JWA2 | L5JSV5 | Neurofascin. | Neuronal cell adhesion molecule. | 0.645 |
L5JWA2_PTEAL | PTPRG | L5JWA2 | L5KB95 | Neurofascin. | Receptor-type tyrosine-protein phosphatase gamma. | 0.566 |
L5K7U6_PTEAL | CNTN2 | L5K7U6 | L5JXU1 | Receptor-type tyrosine-protein phosphatase gamma. | Contactin-2. | 0.606 |
L5K7U6_PTEAL | L5JWA2_PTEAL | L5K7U6 | L5JWA2 | Receptor-type tyrosine-protein phosphatase gamma. | Neurofascin. | 0.566 |
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