Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDH24 | L5JYN5_PTEAL | L5KIT7 | L5JYN5 | Cadherin-24; Cadherins are calcium-dependent cell adhesion proteins. | LIM and calponin like proteiny domains-containing protein 1. | 0.543 |
CDH24 | L5KBB8_PTEAL | L5KIT7 | L5KBB8 | Cadherin-24; Cadherins are calcium-dependent cell adhesion proteins. | Dynein heavy chain 7, axonemal. | 0.459 |
L5JS62_PTEAL | L5JYN5_PTEAL | L5JS62 | L5JYN5 | GAS2-like protein 2. | LIM and calponin like proteiny domains-containing protein 1. | 0.536 |
L5JS62_PTEAL | L5KBB8_PTEAL | L5JS62 | L5KBB8 | GAS2-like protein 2. | Dynein heavy chain 7, axonemal. | 0.492 |
L5JS62_PTEAL | SHISA3 | L5JS62 | L5JYP0 | GAS2-like protein 2. | Protein shisa-3 like protein. | 0.718 |
L5JYN5_PTEAL | CDH24 | L5JYN5 | L5KIT7 | LIM and calponin like proteiny domains-containing protein 1. | Cadherin-24; Cadherins are calcium-dependent cell adhesion proteins. | 0.543 |
L5JYN5_PTEAL | L5JS62_PTEAL | L5JYN5 | L5JS62 | LIM and calponin like proteiny domains-containing protein 1. | GAS2-like protein 2. | 0.536 |
L5JYN5_PTEAL | L5K5T2_PTEAL | L5JYN5 | L5K5T2 | LIM and calponin like proteiny domains-containing protein 1. | Thioredoxin domain-containing protein 12. | 0.622 |
L5JYN5_PTEAL | L5KBB8_PTEAL | L5JYN5 | L5KBB8 | LIM and calponin like proteiny domains-containing protein 1. | Dynein heavy chain 7, axonemal. | 0.522 |
L5JYN5_PTEAL | L5KHZ0_PTEAL | L5JYN5 | L5KHZ0 | LIM and calponin like proteiny domains-containing protein 1. | Zinc finger protein 445. | 0.727 |
L5JYN5_PTEAL | L5KQZ2_PTEAL | L5JYN5 | L5KQZ2 | LIM and calponin like proteiny domains-containing protein 1. | Epidermal growth factor receptor kinase substrate 8-like protein 2. | 0.606 |
L5JYN5_PTEAL | METAP1 | L5JYN5 | L5KQP6 | LIM and calponin like proteiny domains-containing protein 1. | Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | 0.518 |
L5JYN5_PTEAL | SHISA3 | L5JYN5 | L5JYP0 | LIM and calponin like proteiny domains-containing protein 1. | Protein shisa-3 like protein. | 0.542 |
L5JYN5_PTEAL | ZFP28 | L5JYN5 | L5KBS4 | LIM and calponin like proteiny domains-containing protein 1. | Zinc finger protein 28 like protein. | 0.597 |
L5JYN5_PTEAL | ZNF827 | L5JYN5 | L5L1B0 | LIM and calponin like proteiny domains-containing protein 1. | Zinc finger protein 827. | 0.562 |
L5K5T2_PTEAL | L5JYN5_PTEAL | L5K5T2 | L5JYN5 | Thioredoxin domain-containing protein 12. | LIM and calponin like proteiny domains-containing protein 1. | 0.622 |
L5K5T2_PTEAL | METAP1 | L5K5T2 | L5KQP6 | Thioredoxin domain-containing protein 12. | Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | 0.720 |
L5KBB8_PTEAL | CDH24 | L5KBB8 | L5KIT7 | Dynein heavy chain 7, axonemal. | Cadherin-24; Cadherins are calcium-dependent cell adhesion proteins. | 0.459 |
L5KBB8_PTEAL | L5JS62_PTEAL | L5KBB8 | L5JS62 | Dynein heavy chain 7, axonemal. | GAS2-like protein 2. | 0.492 |
L5KBB8_PTEAL | L5JYN5_PTEAL | L5KBB8 | L5JYN5 | Dynein heavy chain 7, axonemal. | LIM and calponin like proteiny domains-containing protein 1. | 0.522 |
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