STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L5JYN5_PTEALLIM and calponin like proteiny domains-containing protein 1. (1428 aa)    
Predicted Functional Partners:
L5KHZ0_PTEAL
Zinc finger protein 445.
    
 
 0.727
L5K5T2_PTEAL
Thioredoxin domain-containing protein 12.
    
 0.622
L5KQZ2_PTEAL
Epidermal growth factor receptor kinase substrate 8-like protein 2.
   
 
 0.606
ZFP28
Zinc finger protein 28 like protein.
    
 
 0.597
ZNF827
Zinc finger protein 827.
    
 
 0.562
CDH24
Cadherin-24; Cadherins are calcium-dependent cell adhesion proteins.
   
 
 0.543
SHISA3
Protein shisa-3 like protein.
   
  
 0.542
L5JS62_PTEAL
GAS2-like protein 2.
   
 
 0.536
L5KBB8_PTEAL
Dynein heavy chain 7, axonemal.
    
 
 0.522
METAP1
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
   
  
 0.518
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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