Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
L5K3G8_PTEAL | L5K568_PTEAL | L5K3G8 | L5K568 | Mothers against decapentaplegic like protein 3. | Mothers against decapentaplegic homolog. | 0.957 |
L5K3G8_PTEAL | L5KVL1_PTEAL | L5K3G8 | L5KVL1 | Mothers against decapentaplegic like protein 3. | Interleukin-1. | 0.882 |
L5K3G8_PTEAL | SKI | L5K3G8 | L5L790 | Mothers against decapentaplegic like protein 3. | Ski oncogene. | 0.795 |
L5K3G8_PTEAL | SMAD4 | L5K3G8 | L5K1M8 | Mothers against decapentaplegic like protein 3. | Mothers against decapentaplegic homolog. | 0.983 |
L5K3G8_PTEAL | SMURF1 | L5K3G8 | L5JUI4 | Mothers against decapentaplegic like protein 3. | E3 ubiquitin-protein ligase SMURF1. | 0.771 |
L5K3G8_PTEAL | SMURF2 | L5K3G8 | L5KNK2 | Mothers against decapentaplegic like protein 3. | E3 ubiquitin-protein ligase. | 0.832 |
L5K3G8_PTEAL | STUB1 | L5K3G8 | L5KJB8 | Mothers against decapentaplegic like protein 3. | STIP1 like proteiny and U box-containing protein 1. | 0.882 |
L5K3G8_PTEAL | TGFB1 | L5K3G8 | L5KRZ8 | Mothers against decapentaplegic like protein 3. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.779 |
L5K3G8_PTEAL | TGFBR1 | L5K3G8 | L5KNR8 | Mothers against decapentaplegic like protein 3. | Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. | 0.830 |
L5K3G8_PTEAL | TGFBR2 | L5K3G8 | L5L3V9 | Mothers against decapentaplegic like protein 3. | TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] | 0.774 |
L5K568_PTEAL | L5K3G8_PTEAL | L5K568 | L5K3G8 | Mothers against decapentaplegic homolog. | Mothers against decapentaplegic like protein 3. | 0.957 |
L5K568_PTEAL | L5KVL1_PTEAL | L5K568 | L5KVL1 | Mothers against decapentaplegic homolog. | Interleukin-1. | 0.490 |
L5K568_PTEAL | SKI | L5K568 | L5L790 | Mothers against decapentaplegic homolog. | Ski oncogene. | 0.832 |
L5K568_PTEAL | SMAD4 | L5K568 | L5K1M8 | Mothers against decapentaplegic homolog. | Mothers against decapentaplegic homolog. | 0.994 |
L5K568_PTEAL | SMURF1 | L5K568 | L5JUI4 | Mothers against decapentaplegic homolog. | E3 ubiquitin-protein ligase SMURF1. | 0.773 |
L5K568_PTEAL | SMURF2 | L5K568 | L5KNK2 | Mothers against decapentaplegic homolog. | E3 ubiquitin-protein ligase. | 0.985 |
L5K568_PTEAL | STUB1 | L5K568 | L5KJB8 | Mothers against decapentaplegic homolog. | STIP1 like proteiny and U box-containing protein 1. | 0.901 |
L5K568_PTEAL | TGFB1 | L5K568 | L5KRZ8 | Mothers against decapentaplegic homolog. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.885 |
L5K568_PTEAL | TGFBR1 | L5K568 | L5KNR8 | Mothers against decapentaplegic homolog. | Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. | 0.895 |
L5K568_PTEAL | TGFBR2 | L5K568 | L5L3V9 | Mothers against decapentaplegic homolog. | TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] | 0.864 |
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