Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDC73 | CTR9 | L5KB68 | L5L430 | Parafibromin. | RNA polymerase-associated protein CTR9 like protein. | 0.999 |
CDC73 | L5K3U3_PTEAL | L5KB68 | L5K3U3 | Parafibromin. | RNA polymerase-associated protein LEO1. | 0.999 |
CDC73 | PAF1 | L5KB68 | L5L570 | Parafibromin. | RNA polymerase II-associated factor 1 like protein. | 0.998 |
CDC73 | POLR1C | L5KB68 | L5JLJ9 | Parafibromin. | DNA-directed RNA polymerases I and III subunit RPAC1. | 0.864 |
CDC73 | POLR2B | L5KB68 | L5JW67 | Parafibromin. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.907 |
CDC73 | POLR2I | L5KB68 | L5L2W2 | Parafibromin. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.860 |
CDC73 | RTF1 | L5KB68 | L5K1S4 | Parafibromin. | RNA polymerase-associated protein RTF1 like protein. | 0.996 |
CDC73 | SUPT16H | L5KB68 | L5K5Y4 | Parafibromin. | FACT complex subunit SPT16. | 0.992 |
CDC73 | SUPT4H1 | L5KB68 | L5JS03 | Parafibromin. | Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. | 0.902 |
CDC73 | TNKS1BP1 | L5KB68 | L5L2R7 | Parafibromin. | 182 kDa tankyrase-1-binding protein. | 0.987 |
CTR9 | CDC73 | L5L430 | L5KB68 | RNA polymerase-associated protein CTR9 like protein. | Parafibromin. | 0.999 |
CTR9 | L5K3U3_PTEAL | L5L430 | L5K3U3 | RNA polymerase-associated protein CTR9 like protein. | RNA polymerase-associated protein LEO1. | 0.998 |
CTR9 | PAF1 | L5L430 | L5L570 | RNA polymerase-associated protein CTR9 like protein. | RNA polymerase II-associated factor 1 like protein. | 0.997 |
CTR9 | POLR1C | L5L430 | L5JLJ9 | RNA polymerase-associated protein CTR9 like protein. | DNA-directed RNA polymerases I and III subunit RPAC1. | 0.447 |
CTR9 | POLR2B | L5L430 | L5JW67 | RNA polymerase-associated protein CTR9 like protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.900 |
CTR9 | POLR2I | L5L430 | L5L2W2 | RNA polymerase-associated protein CTR9 like protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.831 |
CTR9 | RTF1 | L5L430 | L5K1S4 | RNA polymerase-associated protein CTR9 like protein. | RNA polymerase-associated protein RTF1 like protein. | 0.998 |
CTR9 | SUPT16H | L5L430 | L5K5Y4 | RNA polymerase-associated protein CTR9 like protein. | FACT complex subunit SPT16. | 0.974 |
CTR9 | SUPT4H1 | L5L430 | L5JS03 | RNA polymerase-associated protein CTR9 like protein. | Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. | 0.897 |
CTR9 | TNKS1BP1 | L5L430 | L5L2R7 | RNA polymerase-associated protein CTR9 like protein. | 182 kDa tankyrase-1-binding protein. | 0.989 |
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