STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L5K6Q1_PTEALLIM homeobox transcription factor 1-beta. (291 aa)    
Predicted Functional Partners:
FOXA2
Hepatocyte nuclear factor 3-beta.
    
 
 0.723
OTX2
Homeobox protein OTX2.
    
 
 0.670
TLX3
T-cell leukemia homeobox protein 3.
    
 
 0.623
LDB1
LIM domain-binding protein 1.
    
 0.603
L5KCE0_PTEAL
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.566
L5JRP7_PTEAL
Paired box protein Pax-2.
    
 
 0.552
PAX5
Paired box protein Pax-5.
    
 
 0.552
L5KI96_PTEAL
Hepatocyte nuclear factor 3-alpha.
    
 
 0.533
OLIG3
Oligodendrocyte transcription factor 3.
    
 
 0.515
L5JN32_PTEAL
T-cell leukemia homeobox protein 1.
    
 
 0.500
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.