Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CPSF1 | L5JW40_PTEAL | L5KJA9 | L5JW40 | Cleavage and polyadenylation specificity factor subunit 1. | Pre-mRNA 3'-end-processing factor FIP1. | 0.962 |
CPSF1 | L5JYA8_PTEAL | L5KJA9 | L5JYA8 | Cleavage and polyadenylation specificity factor subunit 1. | Cleavage stimulation factor 50 kDa subunit. | 0.794 |
CPSF1 | L5K979_PTEAL | L5KJA9 | L5K979 | Cleavage and polyadenylation specificity factor subunit 1. | DNA cross-link repair 1A protein. | 0.689 |
CPSF1 | L5KJJ9_PTEAL | L5KJA9 | L5KJJ9 | Cleavage and polyadenylation specificity factor subunit 1. | Cleavage and polyadenylation specificity factor subunit 1. | 0.948 |
CPSF1 | PCF11 | L5KJA9 | L5JQN4 | Cleavage and polyadenylation specificity factor subunit 1. | Pre-mRNA cleavage complex 2 protein Pcf11. | 0.933 |
CPSF1 | SYMPK | L5KJA9 | L5KQ26 | Cleavage and polyadenylation specificity factor subunit 1. | Symplekin. | 0.973 |
FANCM | L5K8Y4_PTEAL | L5JYG7 | L5K8Y4 | Fanconi anemia group M protein. | ATP-dependent DNA helicase 2 subunit 1. | 0.532 |
FANCM | L5K979_PTEAL | L5JYG7 | L5K979 | Fanconi anemia group M protein. | DNA cross-link repair 1A protein. | 0.679 |
FANCM | XRCC5 | L5JYG7 | L5L1T2 | Fanconi anemia group M protein. | ATP-dependent DNA helicase 2 subunit 2. | 0.507 |
INTS4 | L5K979_PTEAL | L5JNT1 | L5K979 | Integrator complex subunit 4. | DNA cross-link repair 1A protein. | 0.715 |
INTS4 | PCF11 | L5JNT1 | L5JQN4 | Integrator complex subunit 4. | Pre-mRNA cleavage complex 2 protein Pcf11. | 0.610 |
INTS4 | SYMPK | L5JNT1 | L5KQ26 | Integrator complex subunit 4. | Symplekin. | 0.547 |
L5JW40_PTEAL | CPSF1 | L5JW40 | L5KJA9 | Pre-mRNA 3'-end-processing factor FIP1. | Cleavage and polyadenylation specificity factor subunit 1. | 0.962 |
L5JW40_PTEAL | L5JYA8_PTEAL | L5JW40 | L5JYA8 | Pre-mRNA 3'-end-processing factor FIP1. | Cleavage stimulation factor 50 kDa subunit. | 0.924 |
L5JW40_PTEAL | L5K979_PTEAL | L5JW40 | L5K979 | Pre-mRNA 3'-end-processing factor FIP1. | DNA cross-link repair 1A protein. | 0.707 |
L5JW40_PTEAL | L5KJJ9_PTEAL | L5JW40 | L5KJJ9 | Pre-mRNA 3'-end-processing factor FIP1. | Cleavage and polyadenylation specificity factor subunit 1. | 0.962 |
L5JW40_PTEAL | PCF11 | L5JW40 | L5JQN4 | Pre-mRNA 3'-end-processing factor FIP1. | Pre-mRNA cleavage complex 2 protein Pcf11. | 0.912 |
L5JW40_PTEAL | SYMPK | L5JW40 | L5KQ26 | Pre-mRNA 3'-end-processing factor FIP1. | Symplekin. | 0.997 |
L5JYA8_PTEAL | CPSF1 | L5JYA8 | L5KJA9 | Cleavage stimulation factor 50 kDa subunit. | Cleavage and polyadenylation specificity factor subunit 1. | 0.794 |
L5JYA8_PTEAL | L5JW40_PTEAL | L5JYA8 | L5JW40 | Cleavage stimulation factor 50 kDa subunit. | Pre-mRNA 3'-end-processing factor FIP1. | 0.924 |
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