Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANKRD50 | FKBP15 | L5K7Z6 | L5KA54 | Ankyrin repeat domain-containing protein 50. | Peptidylprolyl isomerase. | 0.685 |
ANKRD50 | L5JVF5_PTEAL | L5K7Z6 | L5JVF5 | Ankyrin repeat domain-containing protein 50. | Coiled-coil domain-containing protein 22. | 0.549 |
ANKRD50 | L5KCM6_PTEAL | L5K7Z6 | L5KCM6 | Ankyrin repeat domain-containing protein 50. | TBC1 domain family member 23. | 0.619 |
ANKRD50 | L5KWI9_PTEAL | L5K7Z6 | L5KWI9 | Ankyrin repeat domain-containing protein 50. | Vacuolar protein sorting-associated protein 35. | 0.651 |
ANKRD50 | VPS35 | L5K7Z6 | L5KV95 | Ankyrin repeat domain-containing protein 50. | Vacuolar protein sorting-associated protein 35. | 0.651 |
ATG9A | FKBP15 | L5L0M2 | L5KA54 | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | Peptidylprolyl isomerase. | 0.647 |
ATG9A | L5KWI9_PTEAL | L5L0M2 | L5KWI9 | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | Vacuolar protein sorting-associated protein 35. | 0.500 |
ATG9A | VPS35 | L5L0M2 | L5KV95 | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | Vacuolar protein sorting-associated protein 35. | 0.500 |
CAPZA1 | DCTN2 | L5K3L2 | L5KV66 | F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. | Dynactin subunit 2. | 0.942 |
CAPZA1 | FKBP15 | L5K3L2 | L5KA54 | F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. | Peptidylprolyl isomerase. | 0.657 |
DCTN2 | CAPZA1 | L5KV66 | L5K3L2 | Dynactin subunit 2. | F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. | 0.942 |
DCTN2 | FKBP15 | L5KV66 | L5KA54 | Dynactin subunit 2. | Peptidylprolyl isomerase. | 0.675 |
DCTN2 | L5JVF5_PTEAL | L5KV66 | L5JVF5 | Dynactin subunit 2. | Coiled-coil domain-containing protein 22. | 0.453 |
DCTN2 | STX5 | L5KV66 | L5KQ49 | Dynactin subunit 2. | Syntaxin-5; Belongs to the syntaxin family. | 0.460 |
FKBP15 | ANKRD50 | L5KA54 | L5K7Z6 | Peptidylprolyl isomerase. | Ankyrin repeat domain-containing protein 50. | 0.685 |
FKBP15 | ATG9A | L5KA54 | L5L0M2 | Peptidylprolyl isomerase. | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | 0.647 |
FKBP15 | CAPZA1 | L5KA54 | L5K3L2 | Peptidylprolyl isomerase. | F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. | 0.657 |
FKBP15 | DCTN2 | L5KA54 | L5KV66 | Peptidylprolyl isomerase. | Dynactin subunit 2. | 0.675 |
FKBP15 | GOSR1 | L5KA54 | L5JR60 | Peptidylprolyl isomerase. | Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. | 0.762 |
FKBP15 | L5JVF5_PTEAL | L5KA54 | L5JVF5 | Peptidylprolyl isomerase. | Coiled-coil domain-containing protein 22. | 0.718 |
page 1 of 3