STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L5KAB3_PTEALRibosomal RNA processing protein 1 like protein B. (440 aa)    
Predicted Functional Partners:
EBNA1BP2
Putative rRNA-processing protein EBP2.
   
 
 0.919
BRIX1
Brix domain-containing protein 2.
   
 
 0.917
RSL1D1
Ribosomal L1 domain-containing protein 1.
   
 
 0.912
MAK16
Protein MAK16 homolog; Belongs to the MAK16 family.
   
 
 0.892
L5K4L8_PTEAL
Putative ribosome biogenesis protein RLP24.
   
 
 0.890
MRTO4
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.890
NIFK
MKI67 FHA domain-interacting nucleolar phosphoprotein.
   
 
 0.872
WDR74
WD repeat-containing protein 74.
   
 
 0.872
RPF1
Ribosome production factor 1.
   
 
 0.871
L5JPG2_PTEAL
Brix domain-containing protein 1.
   
 
 0.851
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.