STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L5KB84_PTEALCollagen triple helix repeat-containing protein 1. (238 aa)    
Predicted Functional Partners:
L5KPP4_PTEAL
Protein FAM115A.
      
 0.736
L5KED2_PTEAL
Platelet-derived growth factor receptor-like protein.
      
 0.508
CUNHXorf38
Uncharacterized protein.
      
 0.482
ZNF524
Zinc finger protein 524.
      
 0.482
L5JY73_PTEAL
Zinc finger protein 268.
      
 0.459
L5KG41_PTEAL
Zinc finger protein 268.
      
 0.459
L5L7H6_PTEAL
Cartilage intermediate layer protein 2.
      
 0.457
LIPT1
Lipoyltransferase 1, mitochondrial.
      
 0.453
MATN3
Matrilin-3.
   
  
 0.451
CRABP2
Cellular retinoic acid-binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
      
 0.450
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.