STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBA6Ubiquitin-like modifier-activating enzyme 6; Belongs to the G-protein coupled receptor 1 family. (1316 aa)    
Predicted Functional Partners:
UBE2Z
Ubiquitin-conjugating enzyme E2 Z.
  
 0.836
L5JYM4_PTEAL
Ubiquitin-conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.832
L5L6X9_PTEAL
60S ribosomal protein L40.
   
 0.828
UBE2N
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
  
 0.811
UBE2G1
Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.805
L5L593_PTEAL
NEDD8-conjugating enzyme Ubc12; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.765
UBC
Ubiquitin.
   
 0.762
L5KWC8_PTEAL
Ubiquitin.
   
 0.762
UBE2F
NEDD8-conjugating enzyme UBE2F; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.759
L5L065_PTEAL
Putative E3 ubiquitin-protein ligase TRIP12.
   
 0.754
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.