Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATP5F1A | CDCA8 | L5K2R5 | L5JU06 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Borealin. | 0.999 |
ATP5F1A | CS | L5K2R5 | L5KUZ8 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Citrate synthase; Belongs to the citrate synthase family. | 0.872 |
ATP5F1A | L5JQX3_PTEAL | L5K2R5 | L5JQX3 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Mitochondrial-processing peptidase subunit beta. | 0.867 |
ATP5F1A | L5KCE8_PTEAL | L5K2R5 | L5KCE8 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ADP/ATP translocase 3; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.569 |
ATP5F1A | L5KUD0_PTEAL | L5K2R5 | L5KUD0 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Cytochrome b-c1 complex subunit 1, mitochondrial. | 0.899 |
ATP5F1A | VDAC1 | L5K2R5 | L5JUW4 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Voltage-dependent anion-selective channel protein 1. | 0.652 |
ATP5F1A | VDAC2 | L5K2R5 | L5KG98 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Voltage-dependent anion-selective channel protein 2. | 0.546 |
ATP5F1A | VDAC3 | L5K2R5 | L5KBI4 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Voltage-dependent anion-selective channel protein 3. | 0.546 |
CDCA8 | ATP5F1A | L5JU06 | L5K2R5 | Borealin. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
CDCA8 | CS | L5JU06 | L5KUZ8 | Borealin. | Citrate synthase; Belongs to the citrate synthase family. | 0.713 |
CDCA8 | L5JQX3_PTEAL | L5JU06 | L5JQX3 | Borealin. | Mitochondrial-processing peptidase subunit beta. | 0.850 |
CDCA8 | L5KCE8_PTEAL | L5JU06 | L5KCE8 | Borealin. | ADP/ATP translocase 3; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.580 |
CDCA8 | L5KUD0_PTEAL | L5JU06 | L5KUD0 | Borealin. | Cytochrome b-c1 complex subunit 1, mitochondrial. | 0.850 |
CDCA8 | VDAC1 | L5JU06 | L5JUW4 | Borealin. | Voltage-dependent anion-selective channel protein 1. | 0.546 |
CDCA8 | VDAC2 | L5JU06 | L5KG98 | Borealin. | Voltage-dependent anion-selective channel protein 2. | 0.546 |
CDCA8 | VDAC3 | L5JU06 | L5KBI4 | Borealin. | Voltage-dependent anion-selective channel protein 3. | 0.546 |
CS | ATP5F1A | L5KUZ8 | L5K2R5 | Citrate synthase; Belongs to the citrate synthase family. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.872 |
CS | CDCA8 | L5KUZ8 | L5JU06 | Citrate synthase; Belongs to the citrate synthase family. | Borealin. | 0.713 |
CS | L5JQX3_PTEAL | L5KUZ8 | L5JQX3 | Citrate synthase; Belongs to the citrate synthase family. | Mitochondrial-processing peptidase subunit beta. | 0.541 |
CS | L5KCE8_PTEAL | L5KUZ8 | L5KCE8 | Citrate synthase; Belongs to the citrate synthase family. | ADP/ATP translocase 3; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.595 |
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