STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEXMIFDUF4683 domain-containing protein. (1474 aa)    
Predicted Functional Partners:
RLIM
E3 ubiquitin-protein ligase RLIM.
 
    
 0.789
TVP23A
Golgi apparatus membrane protein TVP23 homolog.
      
 0.652
L5KZK1_PTEAL
E3 ubiquitin-protein ligase RFWD2.
      
 0.651
PHACTR2
Phosphatase and actin regulator.
      
 0.589
EPHX4
Epoxide hydrolase 4.
      
 0.571
L5KLV9_PTEAL
F-box/LRR-repeat protein 17.
      
 0.522
GSC
Homeobox protein goosecoid.
      
 0.521
ZBTB2
Zinc finger and BTB domain-containing protein 2.
      
 0.519
CACNA1I
Voltage-dependent T-type calcium channel subunit alpha-1I.
      
 0.517
L5KBY0_PTEAL
Voltage-dependent T-type calcium channel subunit alpha-1I.
      
 0.517
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.