STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L5KEH4_PTEALPoly(A)-specific ribonuclease PARN-like domain-containing protein 1. (446 aa)    
Predicted Functional Partners:
TDRKH
Tudor and KH domain-containing protein.
      
 0.859
TDRD5
Tudor domain-containing protein 5.
      
 0.799
PLD6
Phospholipase D6.
      
 0.784
L5KJ26_PTEAL
mRNA-decapping enzyme 2.
     
 0.720
DEDD
Death effector domain-containing protein.
      
 0.602
PTDSS2
Phosphatidylserine synthase 2.
   
  
 0.559
L5KBM9_PTEAL
Terminal uridylyltransferase 7.
   
  
 0.556
L5JPG3_PTEAL
Putative ATP-dependent RNA helicase TDRD9.
   
 
 0.527
MOV10
Putative helicase MOV-10.
      
 0.518
L5K7N5_PTEAL
Putative helicase Mov10l1.
      
 0.518
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.