STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGCGGamma-sarcoglycan. (224 aa)    
Predicted Functional Partners:
SGCA
Alpha-sarcoglycan.
   
 0.893
DAG1
Dystroglycan.
    
 0.851
SSPN
Sarcospan.
   
 0.838
L5KPF1_PTEAL
Epsilon-sarcoglycan.
   
 0.718
SGCB
Beta-sarcoglycan.
   
 0.655
PURA
Transcriptional activator protein Pur-alpha.
      
 0.617
SGCD
Delta-sarcoglycan.
  
 
0.604
L5L0P1_PTEAL
Delta-sarcoglycan.
  
 
0.598
BGN
Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.
   
  
 0.596
FLNC
Filamin-C.
   
 
 0.594
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.