STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIMP3Metalloproteinase inhibitor 3. (211 aa)    
Predicted Functional Partners:
MMP9
Matrix metalloproteinase-9.
   
 0.984
ADAM17
Disintegrin and metalloproteinase domain-containing protein 17; Belongs to the 14-3-3 family.
    
 0.912
MMP15
Matrix metalloproteinase-15.
   
 0.783
MMP7
Matrilysin.
   
 0.782
MMP13
Collagenase 3.
   
 0.705
MMP16
Matrix metalloproteinase-16.
   
 0.694
ADAMTS5
A disintegrin and metalloproteinase with thrombospondin motif 5.
    
 
 0.689
VTN
Vitronectin.
    
 0.662
L5KG36_PTEAL
Matrix metalloproteinase-26.
   
 0.651
MMP20
Matrix metalloproteinase-20.
   
 0.651
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.