STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGD6FYVE, RhoGEF and PH domain-containing protein 6. (845 aa)    
Predicted Functional Partners:
L5KFQ8_PTEAL
FYVE, RhoGEF and PH domain-containing protein 6.
 
      0.899
L5K6K2_PTEAL
Dynamin-binding protein.
     
 0.527
ARHGEF16
Rho guanine nucleotide exchange factor 16.
   
  
 0.518
GGT5
Gamma-glutamyltransferase 5.
      
 0.518
MOCOS
Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.
      
 0.516
POC1B
WD repeat-containing protein 51B.
    
 
 0.512
UPK3A
Uroplakin-3a.
      
 0.511
GIT1
ARF GTPase-activating protein GIT1.
      
 0.510
LYRM7
LYR motif-containing protein 7; Belongs to the complex I LYR family.
      
 0.510
L5K4L7_PTEAL
Cytokine-dependent hematopoietic cell linker.
      
 0.502
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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