Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACTR6 | DMAP1 | L5KF80 | L5KP93 | Actin-related protein 6; Belongs to the actin family. | DNA methyltransferase 1-associated protein 1. | 0.765 |
ACTR6 | L5KHC4_PTEAL | L5KF80 | L5KHC4 | Actin-related protein 6; Belongs to the actin family. | Helicase SRCAP. | 0.853 |
ACTR6 | L5KQ35_PTEAL | L5KF80 | L5KQ35 | Actin-related protein 6; Belongs to the actin family. | Histone H2A; Belongs to the histone H2A family. | 0.885 |
ACTR6 | RUVBL1 | L5KF80 | L5KVG3 | Actin-related protein 6; Belongs to the actin family. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.967 |
ACTR6 | RUVBL2 | L5KF80 | L5L554 | Actin-related protein 6; Belongs to the actin family. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.955 |
ACTR6 | VPS72 | L5KF80 | L5K3X3 | Actin-related protein 6; Belongs to the actin family. | Vacuolar protein sorting-associated protein 72 like protein. | 0.852 |
ACTR6 | YEATS4 | L5KF80 | L5JVI4 | Actin-related protein 6; Belongs to the actin family. | YEATS domain-containing protein 4. | 0.698 |
DMAP1 | ACTR6 | L5KP93 | L5KF80 | DNA methyltransferase 1-associated protein 1. | Actin-related protein 6; Belongs to the actin family. | 0.765 |
DMAP1 | L5KHC4_PTEAL | L5KP93 | L5KHC4 | DNA methyltransferase 1-associated protein 1. | Helicase SRCAP. | 0.891 |
DMAP1 | L5KQ35_PTEAL | L5KP93 | L5KQ35 | DNA methyltransferase 1-associated protein 1. | Histone H2A; Belongs to the histone H2A family. | 0.884 |
DMAP1 | RUVBL1 | L5KP93 | L5KVG3 | DNA methyltransferase 1-associated protein 1. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.972 |
DMAP1 | RUVBL2 | L5KP93 | L5L554 | DNA methyltransferase 1-associated protein 1. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.960 |
DMAP1 | TRRAP | L5KP93 | L5JX96 | DNA methyltransferase 1-associated protein 1. | Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. | 0.970 |
DMAP1 | VPS72 | L5KP93 | L5K3X3 | DNA methyltransferase 1-associated protein 1. | Vacuolar protein sorting-associated protein 72 like protein. | 0.932 |
DMAP1 | YEATS4 | L5KP93 | L5JVI4 | DNA methyltransferase 1-associated protein 1. | YEATS domain-containing protein 4. | 0.962 |
EP300 | L5KHC4_PTEAL | L5KBW8 | L5KHC4 | Histone acetyltransferase p300. | Helicase SRCAP. | 0.865 |
EP300 | L5KQ35_PTEAL | L5KBW8 | L5KQ35 | Histone acetyltransferase p300. | Histone H2A; Belongs to the histone H2A family. | 0.572 |
EP300 | RUVBL1 | L5KBW8 | L5KVG3 | Histone acetyltransferase p300. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.512 |
EP300 | TRRAP | L5KBW8 | L5JX96 | Histone acetyltransferase p300. | Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. | 0.502 |
L5KHC4_PTEAL | ACTR6 | L5KHC4 | L5KF80 | Helicase SRCAP. | Actin-related protein 6; Belongs to the actin family. | 0.853 |
page 1 of 5