STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDGG/T mismatch-specific thymine DNA glycosylase. (388 aa)    
Predicted Functional Partners:
SUMO1
Small ubiquitin-related modifier.
   
 0.932
SUMO3
Small ubiquitin-related modifier 3.
   
 0.869
TET3
Putative methylcytosine dioxygenase TET3.
      
 0.849
APOBEC1
C->U-editing enzyme APOBEC-1.
      
 0.791
MBD4
Methyl-CpG-binding domain protein 4.
   
  
 0.786
APEX2
DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.
  
 
 0.786
SMUG1
Single-strand selective monofunctional uracil DNA glycosylase.
   
  
 0.749
NFATC2IP
NFATC2-interacting protein.
   
 0.682
UBE2I
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.673
L5KGL1_PTEAL
CREB-binding protein.
    
 
 0.667
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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