STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L5KMG7_PTEALHeterogeneous nuclear ribonucleoprotein L. (629 aa)    
Predicted Functional Partners:
L5KC31_PTEAL
Heterogeneous nuclear ribonucleoprotein K.
   
 0.939
HNRNPR
Heterogeneous nuclear ribonucleoprotein R.
   
 0.874
L5KJA8_PTEAL
Heterogeneous nuclear ribonucleoprotein U.
   
 0.853
DHX9
ATP-dependent RNA helicase A.
   
 
 0.814
UBE2I
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.785
L5JN50_PTEAL
Heterogeneous nuclear ribonucleoproteins A2/B1.
   
 0.774
HNRNPA2B1
Heterogeneous nuclear ribonucleoproteins A2/B1.
   
 0.774
SRSF1
Splicing factor, arginine/serine-rich 1.
   
 0.757
SETD2
Histone-lysine N-methyltransferase SETD2.
    
 
 0.755
HNRNPC
Heterogeneous nuclear ribonucleoprotein C-like 1.
   
 0.746
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.