STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BHLHE41Class E basic helix-loop-helix protein 41. (277 aa)    
Predicted Functional Partners:
BHLHE40
Class E basic helix-loop-helix protein 40.
   
0.919
L5KL03_PTEAL
Class E basic helix-loop-helix protein 41.
 
      0.720
L5KIF2_PTEAL
Cryptochrome-1.
    
 
 0.652
PER1
Period circadian protein like protein 1.
    
 0.609
PER3
Period circadian protein like protein 3.
    
 0.609
PER2
Period circadian protein like protein 2.
    
 0.609
PARP16
Poly [ADP-ribose] polymerase.
      
 0.566
APAF1
Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.
    
 
 0.560
L5KX76_PTEAL
Cryptochrome-2.
    
 
 0.551
DBP
D site-binding protein.
   
 0.491
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.