STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L5KNK4_PTEALRNA polymerase II subunit A C-terminal domain phosphatase SSU72. (193 aa)    
Predicted Functional Partners:
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.846
PCF11
Pre-mRNA cleavage complex 2 protein Pcf11.
   
 
 0.806
SYMPK
Symplekin.
   
 
 0.805
POLR2A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.796
CPSF3
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.796
WDR33
WD repeat-containing protein 33.
    
 0.767
WDR82
WD repeat-containing protein 82.
   
 
 0.739
L5JW40_PTEAL
Pre-mRNA 3'-end-processing factor FIP1.
    
 
 0.726
RBBP6
Retinoblastoma-binding protein 6.
    
 
 0.715
CSTF2T
Cleavage stimulation factor 64 kDa subunit, tau variant.
   
 
 0.692
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.